Pairwise Alignments

Query, 530 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 521 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  137 bits (344), Expect = 1e-36
 Identities = 134/509 (26%), Positives = 221/509 (43%), Gaps = 63/509 (12%)

Query: 5   LTLAAMLSLGVAAGALAAGERHGGTLVFTAPYGSSFATLDVQSSPNTQEEFITQAIHRAL 64
           +  AA+L+ GV+A A         ++ F  P  S    L+  +   +           AL
Sbjct: 7   IVAAALLATGVSASAQTL------SIGFADPVSSVDPELNNHAGDRSL----------AL 50

Query: 65  YSWDSNQN-----KPVLELATSEEVSEDGKVHTYHLRKNAVFHNGKPLTADDIIYSYKRI 119
           + WDS  N     K    LA+S +  +D K   + LR +  + +G P +ADDI++S++R 
Sbjct: 51  HFWDSIINSRDGGKLEPALASSWKALDD-KTWEFKLRTDIKWQDGTPFSADDIVFSFQRS 109

Query: 120 ANPENAFPGASFIAVIKGAEDYIAGKADEISGLKKIDDHTLEITYTGTINPGFPLMQNTT 179
            N             + G+    +G    +  +   D  TL I  T T NP  PL   + 
Sbjct: 110 RN-------------VPGSVASYSGALRTVESVTAKDPATL-IVKTNTPNPMLPLEIASI 155

Query: 180 VIYPSNVEGES-----TFGKNPVGLGAFVFKEHVPGSQVVVEKFDKYYEEGRPYLDRINI 234
            I   +V  +S       G+  VG G + F  +VPG + V E+   YY   +P  +++N 
Sbjct: 156 YIVSKHVGEKSKTEDYNAGRAVVGTGPYKFVSYVPGDRTVFERNPGYYGP-KPLWEKVNY 214

Query: 235 VLMAEDAARDVAFRNKEIDV-SILGPTQYQAYQGEE--------GLKDHLLEVA------ 279
             +   AAR  A    ++DV   +  T  +  + +         GL+  LL+        
Sbjct: 215 RFINNGAARTAALLAGDVDVIDKVAVTDVEKLRKDPKVSVYTYPGLRVLLLQPTFKAGPN 274

Query: 280 EVYTRNIGFNPAFEPFKDKRVRQAINHAINAPLIIERLVKNKAYPASGWLPISSPAFDKD 339
           E  T N G      P  D RVRQA++ AIN   I++R+++     A+ W+P  S  ++ D
Sbjct: 275 EFITDNAGKPLEKNPLLDVRVRQALSLAINRKAIVDRVLQGTVTEANQWMPKGSFGYNPD 334

Query: 340 KAPYAYDPEKAKALLAEAGYADGFEFEVTASPNESWGVP-IVEAILPMLKKVGITVKPKP 398
               AY+ E+AK LLAEAG+  GF+  +    +     P  V+A+     ++G+  K + 
Sbjct: 335 VKDIAYNAEQAKKLLAEAGFPQGFQIAIHVPGDRYPQAPETVQAVAQFWSRIGVKTKVEV 394

Query: 399 VESSTLGEAVTTNNFQAFI--WSNLSGP---DPLNALRCYYSKTAQSACNYTSYASPEFD 453
           V  +        N +   +  W N +G      L  L    +K  + + N+  Y++   D
Sbjct: 395 VPWAVYSGRANKNEYAVSVIAWGNGTGEAGYGLLQTLTTPDAKRGRGSNNWGRYSNESVD 454

Query: 454 KLYEAAQQERDSAKQNDLLRQANNIVQDD 482
           K  +AA  E D+ ++  + R A  +V DD
Sbjct: 455 KALDAATVEFDAKRREAIFRHAAKLVTDD 483