Pairwise Alignments

Query, 530 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  228 bits (581), Expect = 4e-64
 Identities = 170/501 (33%), Positives = 238/501 (47%), Gaps = 24/501 (4%)

Query: 2   LKRLTLAAMLSLGVAAG-ALAAGERHGGTLVFTAPYGSSFATLDVQSSPNTQEEFITQAI 60
           ++ L LA + +  +    ALA   + GG +  T  Y    +TLD     + Q   + +++
Sbjct: 1   MRNLLLAGVCTAALMGNPALADDIKQGGEMTVT--YKDDVSTLDPAIGYDWQNWSMIKSL 58

Query: 61  HRALYSWDSNQNKPVLELATSEEVSEDGKVHTYHLRKNAVFHNGKPLTADDIIYSYKRIA 120
              L  +     +   +LA S E+SEDGK+ T+ LRK   FHNG+ LTA D+ YS +R+ 
Sbjct: 59  FDGLMDYVPGTTELRPDLAESYEISEDGKIFTFKLRKGVKFHNGRELTAQDVKYSIERVV 118

Query: 121 NPENAFPGASFIAVIKGAEDYIAGKADEISGLKKIDDHTL--EITYTGTINPGFPLMQNT 178
           NP    PGA F A IKG E+  AGK  E+SG+   D HT+  E+T           +   
Sbjct: 119 NPATQSPGAGFFATIKGVEEASAGKGGELSGITVQDPHTIRFELTRPDATFLHVMALNFA 178

Query: 179 TVIYPSNVEGE-STFGKNPVGLGAFVFKEHVPGSQVVVEKFDKYYEEGRPYLDRINIVLM 237
            V+    VE   + FGKNPVG GAF   E   G ++V E+F  Y+ EG P LDRI   + 
Sbjct: 179 HVVPKEEVEKHGADFGKNPVGSGAFKLAEWTLGQRLVFERFTDYWNEGLPKLDRITFEVG 238

Query: 238 AEDAARDVAFRNKEIDVSILG--PTQYQAYQGEEGLKDHLLEVAEVYTRNIGFNPAFEPF 295
            E     +  +N EIDV   G  P ++     +   KD ++   +++T  +  N    PF
Sbjct: 239 QEPVVALLRLQNGEIDVPGDGIPPAKFVEVTNDPNFKDLIIRGGQLHTGYVTMNVKMAPF 298

Query: 296 KDKRVRQAINHAINAPLIIERLVKNKAYPASGWLPISSPAFDKDKAPYAYDPEKAKALLA 355
               VR+A+N AIN   I+ R++  +A  A+  LP S P + KD A YAYDPE AK LL 
Sbjct: 299 DKVEVRKAVNMAINKDRIL-RIINGRAVAANQPLPPSMPGYAKDYAGYAYDPEGAKKLLE 357

Query: 356 EAGYADGFEFEVTASPNESWGVPIVEAILPMLKKVGITVKPKPVESSTLGEAVTTNNFQA 415
           +AG  DGF  E+    N      I +AI   LK +GIT   K +  + +  A    N   
Sbjct: 358 QAGLGDGFSTELYVM-NTDPQPRIAQAIQQDLKAIGITASIKSLAQANVIAAGGEENQAP 416

Query: 416 FIWSN-----LSGPDPLN----ALRCYYSKTAQSACNYTSYASPEFDKLYEAAQQERDSA 466
            IWS         PDP N     L C          N++ Y + E DK    A    D A
Sbjct: 417 MIWSGGMAWIADFPDPSNFYGPILGC--GGAVPGGWNWSWYCNEELDKKAAEADAIADPA 474

Query: 467 K---QNDLLRQANNIVQDDAP 484
           K   +  L R     + +DAP
Sbjct: 475 KAAEREALWRDIYLKIMEDAP 495