Pairwise Alignments

Query, 530 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  138 bits (348), Expect = 5e-37
 Identities = 130/519 (25%), Positives = 233/519 (44%), Gaps = 48/519 (9%)

Query: 1   MLKRLTLAAMLSLGVAAGALAAGERHGGTLVFTAPYGSSFATLDVQSSPNTQEEFITQAI 60
           MLK   +  +L  G+ +GA +A       LVF +  GS       Q +  T  +   + +
Sbjct: 1   MLKHAVIPFLLGAGLLSGAPSAVA--ASNLVFCSE-GSPAGFDPGQYTTGTDFDASAETV 57

Query: 61  HRALYSWDSNQNKPVLELATSEEVSEDGKVHTYHLRKNAVFHN------GKPLTADDIIY 114
              L  ++      +  LAT  EVS+DGK +T+HLR+   FH        +P  ADD+++
Sbjct: 58  FNRLTQFERGGTAVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLF 117

Query: 115 SYKRIANPENAFPGASFIAVIKGAEDYIAGKADEISGLKKIDDHTLEITYTGTINPGFPL 174
           ++ R+ + +N F  A +        D   G    I+ ++K+D+HT++ T    ++  F  
Sbjct: 118 TFNRMLDKDNPFRKA-YPTEFPYFTDM--GMDKNIAKVEKLDEHTVKFTLN-EVDAAF-- 171

Query: 175 MQNTTVIYPSNVEGE-----------STFGKNPVGLGAFVFKEHVPGSQVVVEKFDKYYE 223
           +QN  + + S    E           +   + P+G G FVF ++   +Q+  +    Y++
Sbjct: 172 IQNLAMSFASIQSAEYADQLLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQ 231

Query: 224 EGRPYLDRINIVLMAEDAARDVAFRNKEIDVSILG-PTQYQAYQGEEGLKD------HLL 276
                +D +   +  + + R    +  E  V++   P   +  + ++ L+       +L 
Sbjct: 232 PEDVKIDNLIFAITTDASVRMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLG 291

Query: 277 EVA-EVYTRNIGFNPAFEPFKDKRVRQAINHAINAPLIIERLVKNKAYPASGWLPISSPA 335
            +A  V  +  G N A  P    +VRQA++ A++   IIE + +     A   +P +  +
Sbjct: 292 YIAYNVMDKIKGSNEA-NPMAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWS 350

Query: 336 FDKDKAPYAYDPEKAKALLAEAGYADGFEFEVTASPNESWGVPIVEAILPMLK----KVG 391
           +D      A+DPEKAK LL EAG  +G E  + A P +    P  + +  ML+    K+G
Sbjct: 351 YDDSIKDAAFDPEKAKQLLKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIG 410

Query: 392 ITVKPKPVESSTLGEAVTTN-----NFQAFIWSNLSGPDPLNALRCYYSKTAQSACNYTS 446
           I  K   + S   GE +  +           WS  +G DP N L   Y   A    N++ 
Sbjct: 411 IKAK---IVSYEWGEYIKRSKGGEQGAMLIGWSGDNG-DPDNWLGTLYGCDAVDGNNFSK 466

Query: 447 YASPEFDKLYEAAQQERDSAKQNDLLRQANNIVQDDAPV 485
           +    +D L + A+   D AK+ +L ++A +I+++  P+
Sbjct: 467 WCYKPYDDLIKQAKATSDQAKRTELYQKAQHILKEQVPI 505