Pairwise Alignments

Query, 530 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 531 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  135 bits (341), Expect = 3e-36
 Identities = 144/514 (28%), Positives = 224/514 (43%), Gaps = 63/514 (12%)

Query: 4   RLTLAAMLSLGVAAGALAAGER--HGGTL-VFTAPYGSSFATLDVQSSPNTQEEFITQAI 60
           ++ LAA   + +  G+ AA E    GGTL +   P  +    ++  +      +FI   I
Sbjct: 10  KIALAAGAFVALPGGSFAAAEEPVSGGTLKIVYFPEPTQLVAINTSAGG---PQFIGSKI 66

Query: 61  HRALYSWDSNQNKPVLELATSEEVSEDGKVHTYHLRKNAVFHNGKPLTADDIIYSYKRI- 119
           +  L ++D   + P   LA    VS DG  + +HL+ NA FH+GKP+T+ D+ +S  R+ 
Sbjct: 67  YDGLLTYDYELS-PKPSLAKEWSVSADGLEYVFHLQPNAKFHDGKPVTSADVEFSILRLK 125

Query: 120 ----------ANPENAFPGASFIAVIK---GAEDYIAGKADEISGLKKIDDHTLEITYTG 166
                     AN E+       +A +K    A   I   A   S +  +  H  E T+  
Sbjct: 126 EAHPRGRATFANVESIDTSNPLVAKVKLSKPAPGLITALASSESPV--VPKHIFE-TFKP 182

Query: 167 TINPGFPLMQNTTVIYPSNVEGESTFGKNPVGLGAFVFKEHVPGSQVVVEKFDKYYEEGR 226
           T NP            P+ +          +G G FV KE VPGS +++EK   Y++  R
Sbjct: 183 TDNPK-----------PAQI----------IGSGPFVLKEWVPGSHILLEKNANYWDAPR 221

Query: 227 PYLDRINIVLMAEDAARDVAFRNKEIDVSILGPTQYQAYQGEEGLKDHLLEVAE-VYT-- 283
           PYLDR+ I L+ +  AR  A    E D+   GP        E       L+V + +Y   
Sbjct: 222 PYLDRVIIRLINDAGARAAALETGEGDI---GPNPVALADLERLKSIPTLKVDDRIYAYA 278

Query: 284 ---RNIGFNPAFEPFKDKRVRQAINHAINAPLIIERLVKNKAYPASGWLPISSPAFDKDK 340
                +  N   +  K+ +VRQAI HAI+ P +I+ ++   A P+   +      F    
Sbjct: 279 GQQNQLVINLENDYLKELKVRQAIAHAIDVPALIDTVLYGYAVPSPTPISPGLAKFHNPD 338

Query: 341 APYA-YDPEKAKALLAEAGYA---DGFEFEVTASPNESWGVPIVEAILPMLKKVGITVKP 396
             +A +D   A+ LL EAG+     G  F++  + N        + I   L K+GI    
Sbjct: 339 IGFAKFDVALAEKLLDEAGFPRKDGGKRFKLRVTTNPFNPQTYSDFIAQALSKIGIEADI 398

Query: 397 KPVESSTLGEAVTTNNFQAFIWSNLSGP-DPLNAL-RCYYSKTAQSA---CNYTSYASPE 451
           +  +  T  + V T+        +LS   DP   + R Y+SK  +      N + YA+PE
Sbjct: 399 QKFDFGTYVKVVYTDRAWDLSVESLSNTFDPTAGVQRVYWSKNFKIGLPFSNASHYANPE 458

Query: 452 FDKLYEAAQQERDSAKQNDLLRQANNIVQDDAPV 485
            D+L EAA  E D  K+    ++   +V  D PV
Sbjct: 459 VDRLLEAAAVEPDIEKRAAFFKEFQAVVAKDLPV 492