Pairwise Alignments

Query, 530 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 535 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  132 bits (333), Expect = 2e-35
 Identities = 148/518 (28%), Positives = 225/518 (43%), Gaps = 83/518 (16%)

Query: 15  VAAGALAAGERHGGTLVFTAPYGSSFATLDVQSSPNT---------QEEFITQAIHRALY 65
           +A+ AL      G  L    P     ATL + S P              +I+  +   L 
Sbjct: 14  LASVALGVVSLPGLKLNAAEPASGGTATLLISSEPPVLTTIAHTAYNSVYISPKVTEGLL 73

Query: 66  SWDSNQNKPVLELATSEEVSEDGKVHTYHLRKNAVFHNGKPLTADDIIYSYKRIANPENA 125
           ++D + N   L LA S +VS DG  +T++LR    +H+GKP T+ D+ +S   I   +  
Sbjct: 74  TYDFDLNPKPL-LAKSWDVSADGLRYTFNLRPGVKWHDGKPFTSADVAFSISTI---KEV 129

Query: 126 FPGASFIAVIKGAEDYIAGKADEISGLKKIDDHTLEITYTGTINPGFP-----LMQNTTV 180
            P        +G   ++   A E            E+T    ++   P     L    T 
Sbjct: 130 HP--------RGRNTFLNLTAVETPN---------ELTAVLVLSKPAPYLITALAAAETP 172

Query: 181 IYPSNV-EG----ESTFGKNPVGLGAFVFKEHVPGSQVVVEKFDKYYEEGRPYLDRINIV 235
           I P ++ EG    E+     P+G G F FKE V GS +V E+   Y++  RPYLDR+ + 
Sbjct: 173 IVPKHLYEGTKVTENPVNLAPIGTGPFKFKEWVRGSHIVFERNADYWDAPRPYLDRLIVR 232

Query: 236 LMAEDAARDVAFRNKEIDVSILGPTQYQAYQGEEGLKDHLLEVAEV--------YTRNIG 287
            + + +AR +A    EID++   P  Y          D L E+  +        YT +I 
Sbjct: 233 FIPDASARAIAIETGEIDLAPSTPVAYSDL-------DRLKELPSLGFDTNGYQYTNSIS 285

Query: 288 ---FNPAFEPFKDKRVRQAINHAINAPLIIERLVKNKAYPASGWLPIS---SPAFDKDKA 341
              FN   + FKD RVR+A  H I+  +I   +  N  Y A+   PI+   +  F  D  
Sbjct: 286 RVEFNLEKDVFKDVRVRRAFAHVIDRNVIFNTV--NFGYGATIAGPINPKLTKWFVNDLK 343

Query: 342 PYAYDPEKAKALLAEAGY---ADGFEFEVTASPNESWGVPIVEA-------ILPMLKKVG 391
            Y  D + A+ALL EAGY   ADG  F++         VP  EA       I   L KVG
Sbjct: 344 TYPIDLKAAEALLDEAGYKRGADGIRFKLNLD-----YVPSTEAYPRGADYIRQALAKVG 398

Query: 392 ITVKPKPVESSTLGEAVTTNNFQAFIWSNLSGP-DP-LNALRCYYSKTAQSA---CNYTS 446
           + V  +  + +T  + + T+    F +  +S   DP +   R Y+SK  +      N  +
Sbjct: 399 VDVTVRTQDFATYTKRIYTDRDFDFAYEGMSNLFDPTVGVQRLYWSKNFKKGVPFSNGAA 458

Query: 447 YASPEFDKLYEAAQQERDSAKQNDLLRQANNIVQDDAP 484
           Y++P+ D L EAA  E D  K+    ++   I+ +D P
Sbjct: 459 YSNPKVDALLEAAAIEIDPDKRVAQWKEIQQILVEDVP 496