Pairwise Alignments

Query, 271 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 258 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  159 bits (403), Expect = 4e-44
 Identities = 89/245 (36%), Positives = 141/245 (57%), Gaps = 3/245 (1%)

Query: 16  SVLGAAIVAGLVAPAAAQTVETIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDADVAKLL 75
           ++  AA+V      A A  +  IK+ G +++   +D  P+G  DA  +P G D ++A+ +
Sbjct: 6   TLFAAALVCAAPLLAHADKLADIKAKGAIRIATTIDAAPWGFTDAAGKPTGLDVELAENV 65

Query: 76  AKELGVEVTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQPYAGISIGVFGA 135
           AK +GV++ +  VTG NRIPYL SN+VD+++A+LG + ERAK V FS+PYA + +GV+G 
Sbjct: 66  AKAMGVKLELQQVTGANRIPYLLSNKVDVVIAALGSSPERAKQVAFSKPYAAVYLGVYGG 125

Query: 136 ADL-AVTKPEDLAGKTIGVARASTQDTATTKIAPQDANIQRFDDDASAVQALLSGQVELI 194
                  K  DLAG+T+ V + ST D + +++AP  A + R +D AS + A LSGQ  L 
Sbjct: 126 KGTPKFAKVSDLAGQTVAVPKGSTPDLSLSELAP-GAKLIRLEDTASTISAFLSGQAPLF 184

Query: 195 GVSNVVAAQIEAAAPGR-FNQKLQLSQQVQGIAVRKGSSEMLKFVNGFLDKVKADGQLNA 253
             +N +A ++    P +    K  +      +AV+   + +L  +N  +D   ADG L A
Sbjct: 185 AENNFIAQKVADENPAKGIEMKSLIRISPAYMAVQPSETALLAEMNKIIDAQAADGSLAA 244

Query: 254 IHEKW 258
           +  KW
Sbjct: 245 LRLKW 249