Pairwise Alignments

Query, 222 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 258 a.a., polar amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  121 bits (303), Expect = 1e-32
 Identities = 71/197 (36%), Positives = 115/197 (58%), Gaps = 12/197 (6%)

Query: 17  LVGAWLTVRLSCAAMLIGLVVSVFCAWGKTAGPAILRHVIDGYIEIIRNTPFLVQIFFIF 76
           L G WLT  ++ +AML+G V+ +  A  + +   +L   +  Y+ ++R TP LVQI F++
Sbjct: 20  LTGLWLTCLIAVSAMLLGCVLGLAAALLRLSKNPLLHLPVRFYVWLMRGTPLLVQIVFLY 79

Query: 77  FGMPS-----------LGLRLSPN-SAALLALVVNFGAYGTEIIRAGIESIHKGQVEAGW 124
             + +            GL +  N  AA++AL +N GAY  EIIRAGI ++ KGQ EAG 
Sbjct: 80  TALAAGGIFRFEDIDLFGLVVPGNIQAAIIALGLNEGAYMAEIIRAGIGAVDKGQYEAGR 139

Query: 125 ALGLSRPQIFRYVVMKPALRTVYPALTSQFIYLMLNTSVVSVISADDLAAAGNDLQSATF 184
           +LG+   ++ R +V+  A R + P L ++F  ++ NT++VSVI   +L  +   + SATF
Sbjct: 140 SLGMGFAKLMRRIVLPQAFRVIVPPLGNEFNVMLKNTTLVSVIGVQELLLSTQMVTSATF 199

Query: 185 ASFEVYIAVTLIYLALS 201
             FE+Y+ V + +L L+
Sbjct: 200 RVFELYLVVAIYFLMLT 216