Pairwise Alignments

Query, 222 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 222 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  123 bits (308), Expect = 3e-33
 Identities = 67/200 (33%), Positives = 114/200 (57%), Gaps = 1/200 (0%)

Query: 3   EFNFAPVLASFDQLLVGAWLTVRLSCAAMLIGLVVSVFCAWGK-TAGPAILRHVIDGYIE 61
           + +F+PV   +  LL GA +TV ++  A+ +G V+ +    G+       +      Y+ 
Sbjct: 2   DLDFSPVWQGWPDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWIYGACTAYVA 61

Query: 62  IIRNTPFLVQIFFIFFGMPSLGLRLSPNSAALLALVVNFGAYGTEIIRAGIESIHKGQVE 121
            IR TP LVQ+F +FFG+P  G+ L      +L L V  GAY +EI+R  I+SI KGQ  
Sbjct: 62  AIRGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTM 121

Query: 122 AGWALGLSRPQIFRYVVMKPALRTVYPALTSQFIYLMLNTSVVSVISADDLAAAGNDLQS 181
           A  +LG++     R +V+  A+  + P L ++FI L+ N+++VS+++  D+   G  + S
Sbjct: 122 AAQSLGMTPGVAMRQIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIIS 181

Query: 182 ATFASFEVYIAVTLIYLALS 201
            ++ S EVY+A+ ++Y  L+
Sbjct: 182 VSYRSLEVYLAIAVVYFVLT 201