Pairwise Alignments

Query, 222 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 262 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  124 bits (311), Expect = 2e-33
 Identities = 75/207 (36%), Positives = 112/207 (54%), Gaps = 2/207 (0%)

Query: 8   PVLASFDQLLVGAWLTVRLSCAAMLIGLVVSVFCAWGKTAGPAILRHVIDGYIEIIRNTP 67
           PV ++ +    G   TVRL+  + L G++  V  A GK +     R +   YI +IR TP
Sbjct: 46  PVASNAEMFADGTRTTVRLTLVSGLAGILFGVLAALGKLSAFKPARWLASFYIWVIRGTP 105

Query: 68  FLVQIFFIFFGMPSL--GLRLSPNSAALLALVVNFGAYGTEIIRAGIESIHKGQVEAGWA 125
            LVQI F+F  +P L   L+L   ++A +AL  N GAY  E IRAG+ ++ +GQ EA  +
Sbjct: 106 LLVQILFVFLALPVLIPALQLDDFTSACVALAFNAGAYNAESIRAGLLAVPRGQTEASRS 165

Query: 126 LGLSRPQIFRYVVMKPALRTVYPALTSQFIYLMLNTSVVSVISADDLAAAGNDLQSATFA 185
           LGLSR   F  VV+  A +   P L + FI L+ ++S+   I   +L   GN +Q+ATF 
Sbjct: 166 LGLSRGYTFFDVVLPQAFKVSLPPLVNNFISLLKDSSLAYAIGVVELTNVGNRMQAATFQ 225

Query: 186 SFEVYIAVTLIYLALSVGFSALFYALE 212
                  + +IYL L+   + +  A+E
Sbjct: 226 PLPALATIAVIYLLLTTALTQISNAVE 252