Pairwise Alignments

Query, 222 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 265 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  119 bits (297), Expect = 7e-32
 Identities = 68/200 (34%), Positives = 114/200 (57%), Gaps = 1/200 (0%)

Query: 2   YEFNFAPVLASFDQLLVGAWLTVRLSCAAMLIGLVVSVFCAWGKTAGPAILRHVIDGYIE 61
           Y+++F  + +    LL+G   T+  +   +++GL + +    G+ +    +   I  YIE
Sbjct: 45  YDWDFGVLWSYRRLLLIGLAYTLVFTVVCVVLGLAIGLITGLGRLSRNPWISAPIRAYIE 104

Query: 62  IIRNTPFLVQIFFIFFGMPSL-GLRLSPNSAALLALVVNFGAYGTEIIRAGIESIHKGQV 120
           + R TP LVQ+ + ++ +P L GL +S  +AA L L +  GA+ +EI+R GI SI  GQV
Sbjct: 105 VFRCTPVLVQLVWFYYALPVLTGLEISAVAAATLCLSLYGGAFYSEIVRGGIISIDNGQV 164

Query: 121 EAGWALGLSRPQIFRYVVMKPALRTVYPALTSQFIYLMLNTSVVSVISADDLAAAGNDLQ 180
           EA  ALG++R Q+ R +V+  A + + P L SQ I  + NTS++SV++  DL   G  + 
Sbjct: 165 EAARALGMTRMQLMRRIVLPQAFKRMVPPLMSQSIMQLKNTSLLSVLAVPDLLYQGQVIA 224

Query: 181 SATFASFEVYIAVTLIYLAL 200
             T+   E+Y  + + Y A+
Sbjct: 225 HETYRPLELYTFIAVAYFAV 244