Pairwise Alignments

Query, 222 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 221 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  145 bits (367), Expect = 5e-40
 Identities = 75/196 (38%), Positives = 120/196 (61%)

Query: 2   YEFNFAPVLASFDQLLVGAWLTVRLSCAAMLIGLVVSVFCAWGKTAGPAILRHVIDGYIE 61
           Y+F F  +     QL+ G   T+  + +++++G+ + V  +     G   LR V   Y+E
Sbjct: 3   YQFQFDALAPYTGQLVEGLLHTLGYAASSIVLGMAIGVAGSLALVYGGKPLRGVTRVYVE 62

Query: 62  IIRNTPFLVQIFFIFFGMPSLGLRLSPNSAALLALVVNFGAYGTEIIRAGIESIHKGQVE 121
             RNTP LVQ+F I+FG+P+LG+RL    A +++L +  GAY  E+ R+G+ S+ +G  E
Sbjct: 63  FFRNTPALVQLFLIYFGLPNLGIRLEAPVAGVISLALYCGAYMVEVFRSGLMSVPRGLSE 122

Query: 122 AGWALGLSRPQIFRYVVMKPALRTVYPALTSQFIYLMLNTSVVSVISADDLAAAGNDLQS 181
           AG ALGL   Q+  +V+  PALR V+P+L SQ +  ++ TS++S I  +D+  AG+ + S
Sbjct: 123 AGAALGLRPRQVLVHVLFVPALRNVFPSLASQMVLTLIGTSLISQIGVEDIFHAGSFIDS 182

Query: 182 ATFASFEVYIAVTLIY 197
            TF SFEVY+ +  +Y
Sbjct: 183 RTFRSFEVYLVICAMY 198