Pairwise Alignments

Query, 243 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

 Score =  149 bits (377), Expect = 8e-41
 Identities = 78/240 (32%), Positives = 137/240 (57%), Gaps = 6/240 (2%)

Query: 4   PIIECRNLQKWYSGVHALKNVDLTIHPGETVGLVGDNGAGKSTLIKILSGVHHQDSGDVL 63
           P++E R+++K +  V  L++V L    G+   + G+NGAGKSTL+K+L G+H  D G++ 
Sbjct: 16  PLLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGEIR 75

Query: 64  IEGRRVALRSPKDAMRYGLETIYQYNSMVPTMSIARNLFIGREPMKWSVFGVGIMDQKRM 123
           I GR V    P  A + G+  I+Q  +++P  ++A+N+F+G EP +W     G++D+K M
Sbjct: 76  IGGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLGHEPSRW-----GVIDRKAM 130

Query: 124 RVESIQAIADVDLHLRSPDALVGELSGGQRQGVAIARAMHFKSKVLILDEPTNHLSVKET 183
              +  A+  V   +  P    G LS  ++Q V IA+A+   +++L+LDEPT  L   E+
Sbjct: 131 NAGAEAALRRVGCRI-DPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVES 189

Query: 184 DKVIGFVRGLKAQGLTGIFISHNMQHVFQSCDRIVAMARGEIVFDKPTADTSIDEVHALL 243
            K+   +  L+  G+  ++ISH M  V    D I  +  G+++   P A+ +++ +  L+
Sbjct: 190 RKLFDLIAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLM 249



 Score = 80.9 bits (198), Expect = 5e-20
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 5/217 (2%)

Query: 17  GVHALKNVDLTIHPGETVGLVGDNGAGKSTLIKILSGVHHQDSGDVLIEGRRVALRSPKD 76
           G   L  +DL +H GE VG+ G   +GK  L + L G      G V     + A RSP++
Sbjct: 277 GNEVLHGIDLRLHAGEIVGVAGLEASGKVELARALFGERRFTRGTVRAWDDKGAARSPRE 336

Query: 77  AMRYGLETI---YQYNSMVPTMSIARNLFIGREPMKWSVFGVGIMDQKRMRVESIQAIAD 133
           A R G+  +    +   +    S+  N  +    +   + G G   + R  ++++  +  
Sbjct: 337 AARRGIGYLPDDRKREGLGLQQSLRDNAALTLRALAGPLAGAGSAARSRSLIDAL--LNK 394

Query: 134 VDLHLRSPDALVGELSGGQRQGVAIARAMHFKSKVLILDEPTNHLSVKETDKVIGFVRGL 193
           V++     D  VG LSGG +Q V +AR M  + ++ ++ EPT  + V     +   +R  
Sbjct: 395 VEVRAADFDMPVGALSGGNQQKVMVARWMAREPRLWVICEPTRGIDVGAKATIYRLLRAY 454

Query: 194 KAQGLTGIFISHNMQHVFQSCDRIVAMARGEIVFDKP 230
              G   + +S ++  +   CDRI  MA G IV   P
Sbjct: 455 ADAGGAVLVVSSDVAEIIGLCDRICVMALGRIVAHLP 491