Pairwise Alignments

Query, 327 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 325 a.a., xylitol ABC transporter, permease component (from data) from Pseudomonas simiae WCS417

 Score =  184 bits (468), Expect = 2e-51
 Identities = 106/312 (33%), Positives = 174/312 (55%), Gaps = 6/312 (1%)

Query: 5   LKIYLDKPELAGLALLFVLVLVFQAKSNGILLSFENMRGVMGLLPEMALVAIGVTLLMIC 64
           L++ LD+    GL L+F+L+ V  A S+   +++ N   ++       ++A+G+T +++ 
Sbjct: 18  LRLSLDR---FGLPLVFILLCVVMAFSSEYFMTWRNWMDILRQTSINGILAVGMTYVILT 74

Query: 65  GEFDLSVGSVFALMPMSMAVLLNSGVPFTVAVLLGLMICGAIGFINGYVTLQFSIPSFIT 124
              DLSVGS+ A   +  A++   G     AV  G+     +G +NG++    SIP F+ 
Sbjct: 75  KGIDLSVGSILAFAGLCSAMVATQGYGLLAAVSAGMFAGAMLGVVNGFMVANLSIPPFVA 134

Query: 125 TLGMLFIARSLTIVISGGFPPLLPPDLPTWLFTDYIWQGSPFRMSFLWFVVIAALVAALL 184
           TLGML IAR +T +++ G P     DLP       I +  P  +  + F V+A +   +L
Sbjct: 135 TLGMLSIARGMTFILNDGSPIT---DLPDAYLALGIGKIGPIGVPIIIFAVVALIFWMVL 191

Query: 185 SLTNFGNWIRATGGFNEAAASMGIPVKRVKIVCFMLCSVLAGFAGLLQVLRLGSPLPSIG 244
             T +G ++ A GG  ++A + GI V++V    +++  +LAG AG++   R  S LP  G
Sbjct: 192 RYTTYGRYVYAVGGNEKSARTSGIGVRKVMFSVYVVSGLLAGLAGVVLSARTTSALPQAG 251

Query: 245 EGLELQAVAAAVIGGTALAGGIGTVFGAIIGTLLIRTIDNGLVLSRVDANWFKFAIGVLT 304
              EL A+AA VIGGT+L+GG G++ G + G LLI  I+NGL L  V + + + A G++ 
Sbjct: 252 VSYELDAIAAVVIGGTSLSGGTGSIVGTLFGALLIGVINNGLNLLGVSSYYQQVAKGLII 311

Query: 305 MFAVIANAWMGK 316
           +FAV+ + W  K
Sbjct: 312 VFAVLIDVWRKK 323