Pairwise Alignments

Query, 327 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 340 a.a., Inositol transport system permease protein (from data) from Pseudomonas simiae WCS417

 Score =  140 bits (354), Expect = 3e-38
 Identities = 105/321 (32%), Positives = 162/321 (50%), Gaps = 23/321 (7%)

Query: 14  LAGLALLFVLVLVFQAKSNGILLSFENMRGVMGLLPEMALVAIGVTLLMICGEFDLSVGS 73
           L G+ L+F L   +  +    L++ + +  ++  +  + L+AIGVT ++I    DLS GS
Sbjct: 30  LIGIGLVFEL-FGWIVRDQSFLMNSQRLVLMILQVSIIGLLAIGVTQVIITTGIDLSSGS 88

Query: 74  VFALMPMSMAVLLNSG------------VPFTVAVLLGLMICGAIGFINGYVTLQFSIPS 121
           V AL  M  A L  +             +P  + V +GL +    G ING +     IP 
Sbjct: 89  VLALSAMIAASLAQTSDFSRAVFPSLTDLPVWIPVAMGLGVGLLAGAINGSIIAVTGIPP 148

Query: 122 FITTLGMLFIARSLTIVISGGFPPLLPPDLPTWLFTDYIWQGSPFRMSFLWFVVIAALVA 181
           FI TLGM+  AR L    + G P  +  D  T      I  G+   M  + F+V+A +  
Sbjct: 149 FIATLGMMVSARGLARYYTEGQPVSMLSDSYT-----AIGHGA---MPVIIFLVVAVIFH 200

Query: 182 ALLSLTNFGNWIRATGGFNEAAASMGIPVKRVKIVCFMLCSVLAGFAGLLQVLRLGSPLP 241
             L  T +G +  A GG  +AA + GI VKR  I+ + +  +LAG AG++   R  +   
Sbjct: 201 IALRYTKYGKYTYAIGGNMQAARTSGINVKRHLIIVYSIAGLLAGLAGVVASARAATGQA 260

Query: 242 SIGEGLELQAVAAAVIGGTALAGGIGTVFGAIIGTLLIRTIDNGLVLSRVDANWFKFAIG 301
            +G   EL A+AAAVIGGT+LAGG+G + G +IG L++  + +G     VDA       G
Sbjct: 261 GMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFTFVGVDAYIQDIIKG 320

Query: 302 VLTMFAVIANAWMGKMSRKIK 322
           ++ + AV+ + +  K  RK+K
Sbjct: 321 LIIVVAVVIDQYRNK--RKLK 339