Pairwise Alignments

Query, 327 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  145 bits (367), Expect = 1e-39
 Identities = 99/304 (32%), Positives = 154/304 (50%), Gaps = 8/304 (2%)

Query: 14  LAGLALLFVLVLVFQAKSNGILLSFENMRGVMGLLPEMALVAIGVTLLMICGEFDLSVGS 73
           LAG  L  +++  F +       S+     +   +P++ ++A+G+T ++I G  DLSVGS
Sbjct: 29  LAGALLAMIVLFSFLSSH---FWSYGTFSTLANQIPDLMVLAVGMTFVLIIGGIDLSVGS 85

Query: 74  VFALMPMSMAV-LLNSGVPFTVAVLLGLMICGAIGFINGYVTLQFSIPSFITTLGMLFIA 132
           V AL   +++V +L  G     + LLG+ +    G I G VT+ + IPSFI +LG+L +A
Sbjct: 86  VLALAASTVSVAILGWGWGVLPSALLGMAVAALAGSITGGVTVAWRIPSFIVSLGVLEMA 145

Query: 133 RSLTIVISGGFPPLLPPDLPTWLFTDYIWQGSPFRMSFLWFVVIAALVAALLSLTNFGNW 192
           R L    +      +  D   W      +  SP  +  L  +V+A LV   L+ T FG +
Sbjct: 146 RGLAYQFTDSRTAYIG-DAYAWFSNPVAFGVSPAFIIALLVIVLAQLV---LTRTVFGRY 201

Query: 193 IRATGGFNEAAASMGIPVKRVKIVCFMLCSVLAGFAGLLQVLRLGSPLPSIGEGLELQAV 252
           +   G   EA    GI  +  K++ F L  +LAG A L Q+ RL +  P+ G GLELQ +
Sbjct: 202 LIGIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEAADPNAGSGLELQVI 261

Query: 253 AAAVIGGTALAGGIGTVFGAIIGTLLIRTIDNGLVLSRVDANWFKFAIGVLTMFAVIANA 312
           AA VIGGT+L GG G+V     G L+I  +  GL          +   G + + AV+ + 
Sbjct: 262 AAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRIITGAVIVIAVVLDT 321

Query: 313 WMGK 316
           +  +
Sbjct: 322 YRSR 325