Pairwise Alignments

Query, 327 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 326 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  159 bits (402), Expect = 9e-44
 Identities = 106/294 (36%), Positives = 159/294 (54%), Gaps = 7/294 (2%)

Query: 17  LALLFVLVLVFQAKSNGILLSFENMRGVMGLLPEMALVAIGVTLLMICGEFDLSVGSVFA 76
           L LL + V +  A  N   LS  N   ++  +  + ++A+G+T +++ G  DLSVGSV A
Sbjct: 28  LGLLMLCVFLTFASEN--FLSLRNGLNILDQITVLGIMAVGMTFVILLGGIDLSVGSVLA 85

Query: 77  LMPMSMAVLLN-SGVPFTVAVLLGLMICGAIGFINGYVTLQFSIPSFITTLGMLFIARSL 135
           L  M M    N +G+P  +A++L L+   A G + G +   F +P+FI TL M+ +AR L
Sbjct: 86  LSMMIMGWTANVAGMPMGMAIVLALVASAACGLVVGILVTAFRVPAFIATLAMMSVARGL 145

Query: 136 TIVISGGFPPLLPPDLPTWLFTDYIWQGSPFRMSFLWFVVIAALVA-ALLSLTNFGNWIR 194
             +I+ G   +  PD   W     I +      + +  +++  LV+ A L   + G  + 
Sbjct: 146 ANMITDGQQIVGFPD---WFMMLAIERHFGVLTATVLLMLVVVLVSWAFLRFRSEGRTVY 202

Query: 195 ATGGFNEAAASMGIPVKRVKIVCFMLCSVLAGFAGLLQVLRLGSPLPSIGEGLELQAVAA 254
           A GG  E A   GI V  V I  +++C+VLAG AG++   RL S  PS G G EL  +AA
Sbjct: 203 AVGGNPEVARLAGINVPLVTICVYVVCAVLAGLAGIVLAARLDSVQPSSGFGYELDTIAA 262

Query: 255 AVIGGTALAGGIGTVFGAIIGTLLIRTIDNGLVLSRVDANWFKFAIGVLTMFAV 308
            VIGGT+L+GG G + G +IG L+I  + NGL L  V     +  IGV+ + AV
Sbjct: 263 VVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVSPFLQQVIIGVVIVLAV 316