Pairwise Alignments

Query, 540 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 559 a.a., ATP-binding cassette protein, ChvD family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  295 bits (755), Expect = 3e-84
 Identities = 180/512 (35%), Positives = 281/512 (54%), Gaps = 15/512 (2%)

Query: 27  GEKIGLVGPNGAGKTTLFRMITGQELPDEGQVAVEKGMTIGYFDQDVGEMAGRSAVAEVM 86
           G KIG++G NG+GK++L ++I G +   +G+VA   G ++G  +Q+  E+     V EV+
Sbjct: 34  GAKIGVLGLNGSGKSSLLKIIAGMDTEYQGEVAWSSGYSVGMLEQEP-ELDPEKTVKEVV 92

Query: 87  EGA-GPISAVAAELHELETAMSDPDRMDEMDA---IVERYGEVQARYEELDGYALEGRAR 142
           E A      +  E  E+     DP  M++ DA   ++E+ GEVQ + +  + + L+    
Sbjct: 93  EEAVAETVGLLKEFEEINEKFMDPAVMEDPDAMNKLIEKQGEVQEKLDAANAWELDVVLD 152

Query: 143 EVLAGLSFSQEMMDGDVAKLSGGWKMRVALARILLMRPDVMLLDEPSNHLDLESLIWLEN 202
           + +  L       D  V  LSGG K RVAL R+LL  PDV+LLDEP+NHLD ES+ WLE 
Sbjct: 153 KAMDALRLPPS--DAVVENLSGGEKRRVALCRLLLQEPDVLLLDEPTNHLDAESVHWLEQ 210

Query: 203 FLKGYDGALLMTSHDREFMNRIVTKIIEIDGGALTTYSGDYGFYDEQRALNARQQQAQFE 262
            LK Y G ++  +HDR F++ +   I+E+D G    + G+Y  + +Q+     Q++    
Sbjct: 211 HLKQYKGTVIAVTHDRYFLDNVAGWILELDRGEGIPWKGNYSSWLDQKQKRLAQEEKSES 270

Query: 263 RQQAMLAKEIKFIERFKARASHASQVQSRVKKLEKIDRVEPPRRRQTVAFEFLPAPRSGE 322
           ++Q  L +E+++I +   +A  A + ++R+   EK+   +   R   +     P PR G 
Sbjct: 271 KRQKTLERELEWI-KMTPKAKQA-KGKARLNAYEKLVGEDAKERESKLELYIPPGPRLGS 328

Query: 323 DVVNLKSVHKTYGSRTIYDGLDFMVRRRERWCIMGINGAGKSTLLKLVTGTTNPDKGSVS 382
            V+ +  V K+YG + +++ L F + +     I+G NGAGKSTL KL+TG   PD GS  
Sbjct: 329 KVIEVNGVSKSYGDKLLFEDLTFALPQGGIVGIIGPNGAGKSTLFKLITGNEKPDAGSFE 388

Query: 383 LGASVKLGYFAQHSMDLLDGESTILQWLEERFPK----AGQAPLRALAGCFGFSGDDVEK 438
           +G +V+L Y  Q   D LD + T+ Q + E        A +   RA    F FSG D EK
Sbjct: 389 VGETVQLAYVDQEH-DRLDADKTVYQTISEGNENIKLGAKEMNARAYVSKFNFSGSDQEK 447

Query: 439 RCRVLSGGEKARLVMAAMLFDPPNFLVLDEPTNHLDLDTKEMLIKALSAYQGTMLFVSHD 498
           +  VLSGGE+ R+ +A  L +  N L+LDEPTN LD++T   L +AL  + G  + +SHD
Sbjct: 448 KVGVLSGGERNRVHLALTLKENGNLLLLDEPTNDLDVNTLRSLEEALENFGGCAVVISHD 507

Query: 499 RRFLSALSNRVLELTPDG-INQYGGGYSEYVE 529
           R FL  +   +L    D  +  + G +++Y E
Sbjct: 508 RWFLDRICTHILAFEGDSQVYWFEGNFTDYEE 539



 Score =  119 bits (299), Expect = 2e-31
 Identities = 77/251 (30%), Positives = 125/251 (49%), Gaps = 40/251 (15%)

Query: 1   MIRIENISKSNSHRILYIEASAALNRGEKIGLVGPNGAGKTTLFRMITGQELPDEGQVAV 60
           +I +  +SKS   ++L+ + + AL +G  +G++GPNGAGK+TLF++ITG E PD G   V
Sbjct: 330 VIEVNGVSKSYGDKLLFEDLTFALPQGGIVGIIGPNGAGKSTLFKLITGNEKPDAGSFEV 389

Query: 61  EKGMTIGYFDQDVGEMAGRSAVAEVMEGAGPISAVAAELHELETAMSDPDRMDEMDAIVE 120
            + + + Y DQ+                                        D +DA   
Sbjct: 390 GETVQLAYVDQE---------------------------------------HDRLDADKT 410

Query: 121 RYGEVQARYEELDGYALEGRAREVLAGLSFSQEMMDGDVAKLSGGWKMRVALARILLMRP 180
            Y  +    E +   A E  AR  ++  +FS    +  V  LSGG + RV LA  L    
Sbjct: 411 VYQTISEGNENIKLGAKEMNARAYVSKFNFSGSDQEKKVGVLSGGERNRVHLALTLKENG 470

Query: 181 DVMLLDEPSNHLDLESLIWLENFLKGYDGALLMTSHDREFMNRIVTKIIEIDGGA-LTTY 239
           +++LLDEP+N LD+ +L  LE  L+ + G  ++ SHDR F++RI T I+  +G + +  +
Sbjct: 471 NLLLLDEPTNDLDVNTLRSLEEALENFGGCAVVISHDRWFLDRICTHILAFEGDSQVYWF 530

Query: 240 SGDYGFYDEQR 250
            G++  Y+E +
Sbjct: 531 EGNFTDYEENK 541



 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 36/88 (40%), Positives = 56/88 (63%)

Query: 443 LSGGEKARLVMAAMLFDPPNFLVLDEPTNHLDLDTKEMLIKALSAYQGTMLFVSHDRRFL 502
           LSGGEK R+ +  +L   P+ L+LDEPTNHLD ++   L + L  Y+GT++ V+HDR FL
Sbjct: 170 LSGGEKRRVALCRLLLQEPDVLLLDEPTNHLDAESVHWLEQHLKQYKGTVIAVTHDRYFL 229

Query: 503 SALSNRVLELTPDGINQYGGGYSEYVER 530
             ++  +LEL       + G YS ++++
Sbjct: 230 DNVAGWILELDRGEGIPWKGNYSSWLDQ 257