Pairwise Alignments

Query, 551 a.a., protease from Sinorhizobium meliloti 1021

Subject, 806 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  142 bits (359), Expect = 4e-38
 Identities = 108/290 (37%), Positives = 142/290 (48%), Gaps = 63/290 (21%)

Query: 317 GGAGNDAITGNAAANALWGNGGNDRLIGGDGNDNLAGGAGADRLDGGNGTDLANYSNATA 376
           GGAGND I G A  + L+GN GND L+GGDG D L GGAG D + GG G DL        
Sbjct: 525 GGAGNDTIAGLAGNDTLFGNAGNDVLLGGDGADQLEGGAGNDLMFGGAGDDLMR------ 578

Query: 377 GMVADLYSPGSNTGEAAG---DTYVSIERLYGSAFNDTLRGDNRANLLNGLAGN------ 427
           G V D+    +  GE      D     + L G A NDTL G   +++L G +G+      
Sbjct: 579 GDVIDVVGNDTLLGEDGNDWLDAGAGNDWLDGGAGNDTLYGGLGSDVLRGGSGDDVLFGD 638

Query: 428 ---------------------DMLNGRDGNDTLIGGNGADRLIGGGGADTFVFQTTAQSA 466
                                D+L G +GNDTLIGG  AD L GG GAD F  +   +S 
Sbjct: 639 VYSDRSHEISVNPNDTVTGYEDVLLGGNGNDTLIGGYAADLLDGGAGADVFSIRNPNEST 698

Query: 467 PAFRDVIDDFASGV-------------------DRMDLRSIDASSKAIGDQAFLFIGSSA 507
            A  DVI +F   V                   DR+DL  IDA +    + AF FIG++ 
Sbjct: 699 LAAPDVIVNFNGAVVAAEALKGLASYATAGAEGDRIDLSEIDAIAGTTANDAFTFIGTAG 758

Query: 508 FHGKAGELNFRSG----IVSGDVNGDGLADFQIRVMNLS--ALSGSDFLL 551
           F   AG+L +++     ++ GDVNGD  ADF+I+V N++  + S  DF+L
Sbjct: 759 F-SAAGQLRYQASGAVTLIEGDVNGDRTADFRIQV-NIANYSFSAFDFVL 806



 Score = 72.0 bits (175), Expect = 8e-17
 Identities = 89/293 (30%), Positives = 121/293 (41%), Gaps = 54/293 (18%)

Query: 272 PGEWTTTSAAQLAKLHYDGSKVAIGNIANALQYQGDTRSLIENAKGGAGNDAITGNAAAN 331
           PG   T +A +LA      +  A    A+ L  QG   +      G  GND ++G+AA +
Sbjct: 369 PGRSVTAAAEELAM-----AAAAPAWAADLLIPQGAPVAAPVTVTGTTGNDTLSGSAAYD 423

Query: 332 ALWGNGGNDRLIGGDGNDNLA------------GGAGADRLDGGNGTDLAN---YSNATA 376
           AL GN  +D + G  G D+               G+G  ++ G +GTD         AT 
Sbjct: 424 AL-GNPISDAVDGLAGIDSFVLTGALASYSLSFDGSGTLQVSGPDGTDTLTSIELLQATD 482

Query: 377 GMVADLYSPGSNTG-----------EAAGDTYVSIERLYGSAFNDTLRGDNRANLLNGLA 425
           G+    Y  GS  G            AA  T    + L G   ND + G    + + GLA
Sbjct: 483 GV----YPLGSLVGFSQPSLSGLTVSAAATT--GNDYLVGGLQNDAIGGGAGNDTIAGLA 536

Query: 426 GNDMLNGRDGNDTLIGGNGADRLIGGGGADTFVFQTTAQSAPAFRDVID----DFASGVD 481
           GND L G  GND L+GG+GAD+L GG G D  +F           DVID    D   G D
Sbjct: 537 GNDTLFGNAGNDVLLGGDGADQLEGGAGND-LMFGGAGDDLMR-GDVIDVVGNDTLLGED 594

Query: 482 RMDLRSIDASSK-----AIGDQAFLFIGSSAFHGKAGELNFRSGIVSGDVNGD 529
             D     A +      A  D  +  +GS    G +G+      ++ GDV  D
Sbjct: 595 GNDWLDAGAGNDWLDGGAGNDTLYGGLGSDVLRGGSGD-----DVLFGDVYSD 642



 Score = 28.5 bits (62), Expect = 0.001
 Identities = 33/134 (24%), Positives = 45/134 (33%), Gaps = 29/134 (21%)

Query: 240 GGNKILLTVWDGGGTDTYDFSNYTTALKVDLRPGEWTTTSAAQLAKLHYDGSKVAIGNIA 299
           G   +  TV       T D+S   + +   +R    T   AA L +   DG  VA+    
Sbjct: 42  GSQTVTRTVAGRAHAATLDYSAAGSGVAASVRFTGLTDRDAAGLLRYRIDGLDVAL---- 97

Query: 300 NALQYQGDTRSLIENAKGGAGNDAITGNAAANALWGNGGNDRLIGGDGNDNL-AGGAGAD 358
                             G   D +               D  +G DGND++  G  G  
Sbjct: 98  -----------------TGGTLDRLGARIFQQI-------DGFVGADGNDSVYLGIPGGR 133

Query: 359 RLDGGNGTDLANYS 372
             DGG GTD A Y+
Sbjct: 134 SFDGGAGTDRAIYT 147