Pairwise Alignments

Query, 666 a.a., selenocysteine-specific elongation factor from Sinorhizobium meliloti 1021

Subject, 640 a.a., selenocysteyl-tRNA-specific translation elongation factor from Pseudomonas putida KT2440

 Score =  449 bits (1155), Expect = e-130
 Identities = 269/635 (42%), Positives = 378/635 (59%), Gaps = 13/635 (2%)

Query: 1   MIVGTAGHIDHGKTTLVKALTGVDTDRLKEEKARGITIDLGFAYARFAKDA-VTGFVDVP 59
           MIVGTAGHIDHGKT L+ ALTG   D+ +EE+ARG+TIDLG+ YA  ++ A +TGF+DVP
Sbjct: 1   MIVGTAGHIDHGKTALLLALTGQAGDQRQEERARGMTIDLGYRYAALSEGAPLTGFIDVP 60

Query: 60  GHERFIHTMLAGAGGIDYAMLVVAADDGIKPQTLEHLAILDLLGVSRGLVAITKADLADP 119
           GHERFIH MLAGA GID  +LVVAADDG+ PQT EHLAI++LLG+ + LVAI+K D  +P
Sbjct: 61  GHERFIHNMLAGAHGIDLVLLVVAADDGVMPQTREHLAIIELLGIPQALVAISKCDRVEP 120

Query: 120 ARLENLTDEIGAVLSSTSLRDAEILPVSVAAGQGIELLKERLAAAECATAASAVGGRFRL 179
           +RL  +  ++  +L+      A   P+S  +G+G++ L++ L  AE  T   +V G FRL
Sbjct: 121 SRLAEVQMQVSELLAPGPYAGARQFPLSSISGEGVDALRQALLEAEAGTRQRSVVGGFRL 180

Query: 180 AVDRSFTLSGAGTVVTGTVLSGSVGVGDQVTVSPAGRSARVRSIHAQNQRAERGFAGQRC 239
           AVDR+F ++GAG VVTGT L+G V  GD + +  AG+  RVR +HAQNQ A    AGQR 
Sbjct: 181 AVDRAFAVTGAGVVVTGTALAGRVSAGDTLLLGKAGKVVRVRGLHAQNQAALVAEAGQRV 240

Query: 240 ALNLAGEGISKDAITRGDMVVDPHLHAPSDRLDADLSVLESETKPIGEWFSARFHHASAE 299
           ALN+A E ++ + + RGD +V   LHAPS R+D +L +L  E +    + +   H  + +
Sbjct: 241 ALNIAAERLAVEQVHRGDWLVPEWLHAPSVRVDIELYLLPDEKRAFEHFSAVHVHLGTQD 300

Query: 300 TGIRIVPLEG-PLLPGERRRVQLVLDRPIAAAVGDRFILRDVSARRTIGGGRLLDLRAPA 358
              R+  LEG  L  G+R   QL+L+ P+ A  GDR +LRD  A+RT+GGG++LD  AP+
Sbjct: 301 VTARVALLEGESLAAGQRMFAQLLLNAPLQAVHGDRLVLRDQRAQRTLGGGKVLDPFAPS 360

Query: 359 RKRRSPERLSYLQA-ASLSHAGEALAALLDVPPFLVDLDVFAR--DRALSEAELQNAIRS 415
           R+RRS  RL  LQ     +   +AL ALL   P  +      R  +R     +L + +R 
Sbjct: 361 RQRRSDARLQQLQVLRDAADLEQALPALLASAPGGISPQRLERQFNRLRETWQLPDDVR- 419

Query: 416 ASAEVIEGSAVRHALSKRQRAAFSDEVQRVLSAFHVENPDLQGIGRERLRLQVTPRLPPP 475
               V+     +   +  Q  A   +V   L+ FH + PD  G  R+RLR  V   L  P
Sbjct: 420 ----VVATRQGQLLFANAQWQALKQQVLEQLARFHEQEPDQLGPDRDRLRRFVALPLERP 475

Query: 476 AFLVALRAEQTAGRLVLEGAFVRLPGHEVRLSEKEEELYARILPHLEGEERFRPPRVRDF 535
           AF+  L        +   G ++ LP H+V+LSE +  L+AR+ P L   + F PP VR  
Sbjct: 476 AFVSLLDELLDDSAIASSGPWLHLPDHKVQLSEADSALWARLQPKLIAGQ-FDPPWVRTL 534

Query: 536 AEALGVDEREIRRILKLCARLGRVDQIRHDHFFTRQTTAEMVAIIRQVAANAERGEFSAG 595
           A      E ++R +L+  ARLG V Q+  D F+   T   M A++   A+  +  + +A 
Sbjct: 535 ASEENCAEADVRLLLRKLARLGLVHQVVRDLFYPEATLQRMAALMLGQASETQIVQVAA- 593

Query: 596 LFRDRVNNGRKVAIEILEFFDRQGVTIRHGDVRRV 630
            FRD +  GRK +++ILE+FDR G+T R  D R +
Sbjct: 594 -FRDMLGIGRKRSVQILEYFDRIGLTRRVADQRHI 627