Pairwise Alignments

Query, 424 a.a., ABC transporter for Lactose, periplasmic substrate-binding component (from data) from Sinorhizobium meliloti 1021

Subject, 428 a.a., ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

 Score = 60.8 bits (146), Expect = 7e-14
 Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 13/160 (8%)

Query: 119 DYSGFAPYKVELMTLDGQVYGMPFDSGVTGLYYRKDYLEAAGFKPEDMQDLTWDRFIEIG 178
           DY+ F P + ++ T DGQ +  P   G   L YRKD LE AG KP      T + F E  
Sbjct: 120 DYADFDPGRQKVATFDGQAWFAPLTGGGDLLVYRKDLLEKAGIKP----PTTLEEFAEAA 175

Query: 179 KQVEEKT----GKKMMGLDPNDAGLVR---IIMQSAGQWYFDKEGKPNIAGNAALKAALE 231
           K++ +      G  + G   + A + R         GQW FD + KP     AA+KA   
Sbjct: 176 KKLNDPANGVYGVALRGQRGSGANVWRWMPFFRGYGGQW-FDGD-KPVFDSPAAVKATQT 233

Query: 232 TIGKIMQANIYKPANGWSDWVGTFTSGDVATVVTGVWITG 271
            +     +       GW +  G F +G VA ++    + G
Sbjct: 234 YLDLFKYSAPGTKTGGWDEATGAFLAGKVAMLIESTPLAG 273