Pairwise Alignments

Query, 424 a.a., ABC transporter for Lactose, periplasmic substrate-binding component (from data) from Sinorhizobium meliloti 1021

Subject, 434 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 67.8 bits (164), Expect = 6e-16
 Identities = 94/385 (24%), Positives = 150/385 (38%), Gaps = 57/385 (14%)

Query: 11  RIAGLALAGASFLGVTAAQAKEITIWCW-----DPNFNVAIMKEAGARYTKTHPDVTFNI 65
           R++ LA      L   A+ A   T+  W      P + V + ++  A+Y   H  V   +
Sbjct: 14  RLSALAAVAGMALLFDASHASADTVVKWLHLETVPAY-VKMWEDIAAKYESEHAGVDIQL 72

Query: 66  VDFAKLDVEQKLQTGLSSGTADALPDIVLIEDYGAQKYLQSFPGAFAPLSGTVDYSGFA- 124
                   + KL T L S   D  P        G  K  QS  GA   L+  +   G A 
Sbjct: 73  QFLENEAFKAKLPTLLQS---DDAPHFFYSWGGGVLKQ-QSETGALMDLTEAMRADGGAW 128

Query: 125 -----PYKVELMTLDGQVYGMPFDSGVTGLYYRKDYLEAAGFKPEDMQDLTWDRFIEIGK 179
                P  ++  T D ++Y +PF  G    +Y K+  +  G K ED++  TWD F+   K
Sbjct: 129 EKSYNPAALKGFTFDDRIYAVPFKMGTISFFYNKELFQKGGVKAEDIK--TWDDFLTAVK 186

Query: 180 QVEEKTGKKMMGLDPNDAG----------LVRIIMQSAGQWYFDKEGKPNIAGNAALKAA 229
            ++E       G+ P   G             ++M++ GQ  F  E   N  G   L+ A
Sbjct: 187 TLKE------AGITPIAGGGGDKWPLHFYWSYLVMRNGGQQVF--EDAKNNEGEGFLQPA 238

Query: 230 LETIG-KIMQANIYKPANG------WSDWVGTFTSGDVATVVTGVWITGTVKAQP-DQSG 281
           +   G ++ +    +P  G      W   +G F  G  A +++      T +A   D  G
Sbjct: 239 IIKAGEQLAELGKLEPFQGGYLGANWPQTLGLFGDGKAAMILSFENTEATQRANSGDGKG 298

Query: 282 ----NWGVAPIPALSIEGATHASNLGG-SSWYVLESSEEKAEAIDFLNEIYAKDIDFYQK 336
               N G  P PA+          LGG + W V +++    EA+DFL  +   + +    
Sbjct: 299 LAAENIGRFPFPAVEGGAGAATDTLGGLNGWAVTKNA--PPEALDFLRYLTNAENE---- 352

Query: 337 ILQDRGAVGSLLAARGGAAYEAADP 361
             +   +VG ++ A  GA     +P
Sbjct: 353 --RLMASVGMIVPAAAGAEDGVTNP 375