Pairwise Alignments

Query, 693 a.a., ABC transporter for D-Raffinose, periplasmic substrate-binding protein (from data) from Sinorhizobium meliloti 1021

Subject, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score = 67.4 bits (163), Expect = 2e-15
 Identities = 123/552 (22%), Positives = 201/552 (36%), Gaps = 106/552 (19%)

Query: 117 WNYSAGQTQGWGGIDIGMFECLTRTAPLFQVEADDM------------------EPLPNL 158
           W+ +AG  Q  G + IG  E  T   P+   +  D                   +  P L
Sbjct: 17  WSLTAGLAQAAGVLTIGCREDSTTFDPIKSAQNRDTWVFANVYDTLVRVDNLGTKMEPGL 76

Query: 159 AKSWDWSEDGRKLTMHLIEGAKWSDGDPFDADDVMFYW---EDNVLDSSVSPLNGATPET 215
           A+SWD S+DG   T  L + AK+SDG    ADD  F      DN       P N      
Sbjct: 77  AESWDISKDGLTYTFKLRD-AKFSDGSAITADDAAFSLLRIRDNKASLWADPFNLIN--- 132

Query: 216 FGEGTTLKKIDQYTVEWTFKEAFPRQHLFAMAYGTFCPGPS-HILKTKHPKYAGTTYNEY 274
                T K  D  T+  T K         A+A+ +    P+  IL  K            
Sbjct: 133 -----TAKASDPKTLVVTLKTP-------AVAFLSQLASPTVSILSEKAMT--------- 171

Query: 275 KNGFPAEYMNLPVMGAWVPVAYRPDDIIVLRRNPYYWKVDEAGNQLPYLNELHYKLSTWA 334
           K G  A   N    GA+    +R  D ++L++NP +W+          L+ + +   T  
Sbjct: 172 KMGEDAYSENPVTSGAFTVDEWRKGDRVILKKNPNFWQAKNVS-----LDGVEWVSVTDD 226

Query: 335 DRDVQAIAGSGDISNLEQPENFVESLKRAANESAPARLAFGPRVIGYNMHMNFSGNGWGD 394
           +  ++ +  +   + +  P + VE LK+  N    A     P     ++ +N        
Sbjct: 227 NTRMRMVQNNELDTAIFVPFSRVEELKKDKNVVIHA----DPSTREDHLLINHEHGLLAK 282

Query: 395 PDERAKAVRELNRNLDFRKAVTMAVDRKKLGEALVKGPFTAIY---PGGLSSGTSFYDRN 451
           P              + R+A+ MA+D++ L +    G  T  Y   P G     S Y   
Sbjct: 283 P--------------EVRQALDMAIDKQSLVKTATYGQGTVAYSYIPKG-----SLYHYA 323

Query: 452 STIYYPHDLEGAKVLLEKVGLKDTDGNGFVNFPAGKLGGRDVEIVLLVNSDYSTDRNLAE 511
           + +  P+D   AK LLE+ G K                  D+++  +VN+    D  +A 
Sbjct: 324 NNLQRPYDPTAAKKLLEQAGAK------------------DLKLNYVVNAGNEADEQIAV 365

Query: 512 GMVGQMEKLGLRVVLNALDGKQRDAANYAGRFDWMIHRNTAEFASVVQNTPQLAPTGPRT 571
            +  Q+ K+G+   L  +D  Q       G +D  +   T +     Q T  +       
Sbjct: 366 IIKDQLAKVGVTANLQKVDPTQSWQMLVDGEYDISVMYWTNDILDPDQKTTFVLGHDTNQ 425

Query: 572 SWHHRAPEGGEVDVMPHEQELVDIVNKFIASNDNDERTELMKQYQKVATTNVDTVGLTEY 631
           ++  R              ++  +V +     D  +R ++  + QK+A  +V+ + L   
Sbjct: 426 NYMTRY----------KNDKVKALVAQARIEADPVKREQMYVELQKLAKQDVNWIDLYYS 475

Query: 632 PGALIINKRFSN 643
           P   I  K  SN
Sbjct: 476 PYINISRKNVSN 487