Pairwise Alignments

Query, 693 a.a., ABC transporter for D-Raffinose, periplasmic substrate-binding protein (from data) from Sinorhizobium meliloti 1021

Subject, 633 a.a., mureinpeptideoligopeptide ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  144 bits (362), Expect = 2e-38
 Identities = 150/606 (24%), Positives = 251/606 (41%), Gaps = 64/606 (10%)

Query: 71  VKAGKLPPVAERLPKEPMVFKAGNMPDGMGVYGDVMRHVIGGRPEGWNYSAGQTQGWGGI 130
           V+ GKLPPV ERLPK P V     M    G +G  +R +IG                   
Sbjct: 34  VQEGKLPPVGERLPKTPRVIDVAAMGRKPGRHGGTIRSLIGSAK---------------- 77

Query: 131 DIGMFECLTRTAPLFQVEADDMEPLPNLAKSWDWSEDGRKLTMHLIEGAKWSDGDPFDAD 190
           DI +      T  +   E  +++  P++ +S++  ED R  T HL EG KWSDG P  A+
Sbjct: 78  DIRLMTIYGYTRLVGYDEKLNLQ--PDILESYETVED-RIFTFHLREGHKWSDGTPLTAE 134

Query: 191 DVMFYWEDNVLDSSVSPLNGATPETF--GEGTTLKKIDQYTVEWTFKEAFP--RQHLFAM 246
           D  + +ED +L+  +SP  G  P     G+    + +D+ TV +++    P   Q L A 
Sbjct: 135 DFRYCFEDVLLNEDLSPA-GLPPAMVMDGQAAKFEIVDERTVRYSWPMPNPVFLQEL-AA 192

Query: 247 AYGTFCPGPSHILKTKHPKYA-----------------GTTYNEYKNGFPAEYMNLPVMG 289
                   PS  LK  H KY                     +      +  E  +LP + 
Sbjct: 193 PQPLVVVMPSAYLKQFHTKYQDEDKLKAFLKEQRVKRWSQLHMRMARSYRPENPDLPTLD 252

Query: 290 AWVPVAYRPDDIIVLRRNPYYWKVDEAGNQLPYLNELHYKLSTWADRDVQAIAGSGDISN 349
            W      P +  V  RNPYY +VDE G QLPY++   + LS  +   + A  G+G+   
Sbjct: 253 PWRNTTPLPAEQFVFERNPYYHRVDENGLQLPYID--RFVLSVSSSSLIPAKTGTGESDL 310

Query: 350 LEQPENFVE-SLKRAANESAPARLAFGPRVIGYNMHMNFSGNGWGDPDERAKAVRELNRN 408
                +FV+ +  + A +  P  +    +  G  + +  + N   DP       R L R+
Sbjct: 311 QAYGIDFVDYTYLKDAEKRHPVEVKLWKKTSGSRLALLPNLNS-ADP-----VWRPLLRD 364

Query: 409 LDFRKAVTMAVDRKKLGEALVKGPFTAIYPGGLSSGTSFYDRNSTIYYPHDLEGAKVLLE 468
           +  R+A+++A+DR+++  A   G         L     F    ++ +  HD + A  LL+
Sbjct: 365 VRVRRALSLAIDRREINMAAFYGLTKESADTVLPESPLFRPEFASAWIAHDPDQANALLD 424

Query: 469 KVGLKDTDGNGFVNFPAGKLGGRDVEIVLLVNSDYSTDRNLAEGMVGQMEKLGLRVVLNA 528
             GL     +G    P     GR  +IV+    + + D ++ + +     ++G+ + +  
Sbjct: 425 AAGLAKRGSDGIRILP----DGRKAQIVVETAGESTLDTDVLQLITDYWREVGISLFIRT 480

Query: 529 LDGKQRDAANYAGRFDWMIHRNTAEFASVVQNTP-QLAP-TGPRTSW------HHRAPEG 580
                  +    G     +             +P QLAP T  +  W      +    E 
Sbjct: 481 SQRDTFRSRAVGGEIIMSMWFGLDNGVPTADMSPGQLAPTTDDQLQWPVWGLNYMSHGEM 540

Query: 581 GEVDVMPHEQELVDIVNKFIASNDNDERTELMKQYQKVATTNVDTVGLTEYP-GALIINK 639
           GE   +P   EL+D++ ++  S D+ ER ++ +Q   + T  V ++GL       +++ K
Sbjct: 541 GEAPDLPPVVELLDLLKRWRHSADDAERADIWRQMLSIYTDQVFSIGLVNSSLQPILVTK 600

Query: 640 RFSNIP 645
           +  N P
Sbjct: 601 KLRNFP 606