Pairwise Alignments

Query, 693 a.a., ABC transporter for D-Raffinose, periplasmic substrate-binding protein (from data) from Sinorhizobium meliloti 1021

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score = 85.5 bits (210), Expect = 6e-21
 Identities = 96/354 (27%), Positives = 154/354 (43%), Gaps = 61/354 (17%)

Query: 144 LFQVEADDMEPLPNLAKSWDWSEDGRKLTMHLIEGAKWSDGD------PFDADDVMFYWE 197
           L Q E      +P LA  W+ S+DG+  T HL EG K+   D      PF+ADDV+F + 
Sbjct: 61  LTQFERGGTAVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTF- 119

Query: 198 DNVLDSSVSPLNGATPETFGEGTTL---------KKIDQYTVEWTFKE---AFPRQHLFA 245
           + +LD   +P   A P  F   T +         +K+D++TV++T  E   AF +    A
Sbjct: 120 NRMLDKD-NPFRKAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQN--LA 176

Query: 246 MAYGTFCPGPSHILKTKHPKYAGTTYNEYKNGFPAEYMNLPV-MGAWVPVAYRPDDIIVL 304
           M++ +           +  +YA       KNG  A+    P+  G +V   Y+ D  I  
Sbjct: 177 MSFASI----------QSAEYADQL---LKNGKAADINQKPIGTGPFVFSKYQKDAQIRF 223

Query: 305 RRNPYYWKVDEAGNQLPYLNELHYKLSTWADRDVQAIAGSGDISNLEQPENFVESLKRAA 364
           + N  YW+ ++       ++ L + ++T A   +Q +  +     L      +E LK   
Sbjct: 224 KGNKDYWQPEDV-----KIDNLIFAITTDASVRMQKLKKNECQVTLFPRPADIEPLKADK 278

Query: 365 NESAPARLAFGPRVIGYNMHMNFSGNGWGDPDERAKAVRELNRNLDFRKAVTMAVDRKKL 424
           N   P +  F    I YN+     G+   +P  + K           R+A+ MAVD+KK+
Sbjct: 279 NLQMPQQAGFNLGYIAYNVMDKIKGSNEANPMAQLKV----------RQALDMAVDKKKI 328

Query: 425 GEALVKG----PFTAIYPGGLSSGTSFYDRNSTIYYPHDLEGAKVLLEKVGLKD 474
            E++ +G       A+ P   S   S  D         D E AK LL++ G+K+
Sbjct: 329 IESVYQGAGQLAVNAMPPTQWSYDDSIKDA------AFDPEKAKQLLKEAGIKE 376