Pairwise Alignments

Query, 693 a.a., ABC transporter for D-Raffinose, periplasmic substrate-binding protein (from data) from Sinorhizobium meliloti 1021

Subject, 539 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score = 65.5 bits (158), Expect = 6e-15
 Identities = 84/343 (24%), Positives = 134/343 (39%), Gaps = 56/343 (16%)

Query: 150 DDMEPLPNLAKSWDWSEDGRKLTMHLIEGAKWSDGDPFDADDVMFYWEDNVLDSSVSP-- 207
           DD   +P LA  W+ ++D +  T HL  G KWSDG P  ADDV+F W+      ++SP  
Sbjct: 76  DDGTVMPGLADRWE-NKDNQVWTFHLRPGLKWSDGSPITADDVVFSWQRLADPKTLSPYQ 134

Query: 208 --------LNGA-------TPETFGEGTTLKKIDQYTVEWTFKEAFPRQHLFAMAYGTFC 252
                   LN         +P+  G    +K +D+ TV+ T  +         ++Y  F 
Sbjct: 135 SYIGSLHVLNAGDIIAGKKSPQELG----IKALDKQTVQVTLDQ--------PLSY--FL 180

Query: 253 PGPSHILKTKHPKYAGTTYNEYKNGFPAEYMNLPVMGAWVPVAYRPDDIIVLRRNPYYWK 312
           P   H +    PK A   + +       +  N    G +VP  +  ++ I  +RNP YW 
Sbjct: 181 PMVDHYVMITIPKAAIEKFGDKW----TQTANFVGSGPFVPTEWVVNERITAKRNPNYW- 235

Query: 313 VDEAGNQLPYLNELHYKLSTWADRDVQAIAGSGDISNLEQPENFVESLKRAANESAPARL 372
                N    LN++ Y        +V         +    P    +SLK    +  P  +
Sbjct: 236 ----DNAHTVLNKVTYLAIVSNTAEVNRYKAGEVDATYTMPNQLFKSLK----QELPNEV 287

Query: 373 AFGPRVIGYNMHMNFSGNGWGDPDERAKAVRELNRNLDFRKAVTMAVDRKKLGEALVKGP 432
              P +  Y    N     + D    ++  R L+  LD  K+V   +  K LG+  V  P
Sbjct: 288 KVTPYLSTYIYRFNTQKPPFND----SRVRRALDLALD--KSV---IADKVLGQGQV--P 336

Query: 433 FTAIYPGGLSSGTSFYDRNSTIYYPHDLEGAKVLLEKVGLKDT 475
                P G++   S+    +          AK LL++ G  ++
Sbjct: 337 AYNYVPRGMAGYASYQPEWAGWTQQQRNAEAKKLLKEAGYDES 379