Pairwise Alignments

Query, 678 a.a., NADH-dependent oxidase from Sinorhizobium meliloti 1021

Subject, 686 a.a., dimethylglycine demethylation protein DgcA from Pseudomonas sp. SVBP6

 Score =  521 bits (1343), Expect = e-152
 Identities = 286/685 (41%), Positives = 407/685 (59%), Gaps = 8/685 (1%)

Query: 1   MPNDPLLQPYQLKHLTLRNRIIVTAHEPAYPEDG-MPKERYRAYTVERARGGVAMTMTAG 59
           M  + + QP Q+  LT+RNR++ TAH   Y  DG M  ERY  Y  E+A+GG+ + +  G
Sbjct: 1   MAFEAMFQPIQIGKLTIRNRVLSTAHAEVYATDGGMTTERYVKYYEEKAKGGIGLAICGG 60

Query: 60  SAAVSKDSPPVF-NNLLAYRDEIVPWIREMTDAVHEEGAVIMIQLTHLGRRTRWDKGDWL 118
           S+ V+ DSP  +  ++    D I+P  + + DA+H+ GA IMIQ+TH+GRR+RWD  +W 
Sbjct: 61  SSVVAIDSPQEWWASVNLSTDRIIPHFQNLADAMHKHGAKIMIQITHMGRRSRWDGFNWP 120

Query: 119 PVVAPSHHREAAHRAFPKKIEDWDIDRIIKDFADAAERMKAGGMDGVELEA-YGHLIDQF 177
            +++PS  RE  HRA  K IE  +I R+I ++A AA R K GG+DGVEL A + H+IDQF
Sbjct: 121 TLMSPSGVREPVHRATCKTIEPEEIWRVIGNYAQAARRAKEGGLDGVELSAVHQHMIDQF 180

Query: 178 ASPLTNELDGPYGGSLDNRMRFCFDVLKAIRARVGDEFILGVRYTADECLPGGTDKAEGL 237
            SP  N+    +GG+ + RM+F  +VLKA+RA VG +F +G+R   DE  P G    +  
Sbjct: 181 WSPRVNKRTDEWGGTFEGRMKFGLEVLKAVRAEVGPDFCVGMRICGDEFHPDGLSHEDMK 240

Query: 238 EISKRLKESGLIDYLNIIRGHIDTDPGLTDVIPIQGMANSPHLDFAGEIRAATNFPTFHA 297
           EI+K    +G++D+  +I    DT   L +VIP       P L  A  I+     P  HA
Sbjct: 241 EIAKYYDATGMLDFFGVIGSGCDTHNTLANVIPNMSFPPEPFLHLAAGIKEVVKVPVLHA 300

Query: 298 AKIPDVATARHAIASGKVDMVGMTRAHMTDPHIVRKIIEKREEDIRPCVGANYCLDRIYQ 357
             I D   A   +  G VDMVGMTRAH+ DPH++ KI   + + I+ CVGANYC+DR YQ
Sbjct: 301 QNIKDPNQATRILEGGYVDMVGMTRAHIADPHLIAKIKMGQIDQIKQCVGANYCIDRQYQ 360

Query: 358 GGAAYCIHNAATGRE-LTMPHSIAKA-HCRRKVVVVGTGPAGLEAARVAGERGHEVIVFE 415
           G    CI NAAT RE + +PH I K+   +RKVVVVG GPAG+EAARVA ERGH+V +FE
Sbjct: 361 GLDVLCIQNAATSREYMGVPHIIEKSTGPKRKVVVVGAGPAGMEAARVAAERGHDVTLFE 420

Query: 416 AASDPGGQVRLTAQSPRRREMISIIDWRMSQCEKLGVTFHFNTWAEAEAIQAESPDVVII 475
                GGQ+ + A++P+R ++  I  W   +  +L V     T A+ + IQ    D++++
Sbjct: 421 KKDAIGGQISIAAKAPQRDQIAGITRWYQLELARLKVDLRLGTAADIDTIQDLRADIIVL 480

Query: 476 ATGGLP---HTEVLSRGNELVVSAWDIISGDAKPGTNVLIFDDAGDHAALQAAEFLATAG 532
           A GG P     E       LVVS+WD++ G   PG NVL++D   +   +  A+++A  G
Sbjct: 481 AVGGHPFIEQNEHWGAAEGLVVSSWDVLDGKVAPGKNVLVYDTICEFTGMSVADYIADKG 540

Query: 533 ARVEIMTPDRSFAPEVMAMNLVPYMRCLQKLDVTFTVTYRLEAVEKSGNELVAHVGSDYG 592
           ++VEI+T D      +   +   Y R +   +V  T    LE V + G++LVA + ++Y 
Sbjct: 541 SQVEIVTDDIKPGVAIGGTSFPTYYRSMYPKEVIMTGDLMLEKVYREGDKLVAVLENEYT 600

Query: 593 GISKQRTFDQVVVNHGTIPLDELYFELKPFSSNLGEIAHDQMIAGEPQSVVRNAEGKFQL 652
           G  ++R  DQVV+ +G  P + LY+ LK  S N G+I  + + A +PQ ++      + L
Sbjct: 601 GAKEERVVDQVVIENGVRPDEALYYGLKEGSRNKGQIDIEALFAIKPQPILSQPGEGYLL 660

Query: 653 FRIGDAVAARNTHAAIYDALRLLKD 677
           +RIGD VA RNTHAAIYDALRL KD
Sbjct: 661 YRIGDCVAQRNTHAAIYDALRLCKD 685