Pairwise Alignments

Query, 291 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 279 a.a., Inner membrane ABC transporter permease protein YcjP from Xanthobacter sp. DMC5

 Score =  186 bits (471), Expect = 7e-52
 Identities = 102/267 (38%), Positives = 155/267 (58%), Gaps = 4/267 (1%)

Query: 27  LYAGVAAVLVYMLFPYYWAIVSSTKTGQALYQFT-LLPA-LDFSNYRQLFDNPVFMGALV 84
           LYA    + VY  FP YW +VSST+  QAL   T LLP    +  Y  L +   +    +
Sbjct: 15  LYAAATLIAVYSAFPIYWMVVSSTRAPQALINSTSLLPGPFTWEYYTNLLELTDYPSQFL 74

Query: 85  NSGVVALVSTAVSLVIGILAAYALGRLHFPPGRIVLIAVLMISVFPQVVVLSGMFEVIGW 144
           NS +VA V+  V++V  I+ AYA+ R       I++ A+L   +FP +++   MF +   
Sbjct: 75  NSLIVAAVTVVVTMVFSIMIAYAVTRHRIRGKGIIVGAMLYAYMFPPLLIAIPMFSIFAK 134

Query: 145 LGLYNRPSALIVSYLILTLPFTTWILTSFIRDLPNELEEAALIDGCSRLRILTHVLLPLM 204
           LGL +  +++IVS+L LTLP   W L  F + +P ELEEAA++DGC+RL     V+LPL 
Sbjct: 135 LGLGDTLTSVIVSHLTLTLPLGVWFLWGFFKSMPFELEEAAMVDGCTRLGAFLRVVLPLS 194

Query: 205 GPAIASTGLLSFILAWNEFLFALTFILTDENRTVPVAIGLLTGSSRYEYPFGQIMAASVT 264
            P + +  + SF+L+W ++ +AL  I +D N+TVPV +  + GS  ++  +G+IMA S  
Sbjct: 195 LPGLITVAIFSFLLSWTDYTYALIMIGSDANKTVPVGLASMVGS--FDLRWGEIMAGSTL 252

Query: 265 VTLPLLVLVLIFQRKIVAGLTSGAVKG 291
           + LPL     +  +  + GL +GAVKG
Sbjct: 253 IALPLFGAFALLSQYFIQGLGAGAVKG 279