Pairwise Alignments

Query, 291 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 288 a.a., ABC transporter for L-Fucose, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  150 bits (380), Expect = 2e-41
 Identities = 88/288 (30%), Positives = 148/288 (51%), Gaps = 10/288 (3%)

Query: 12  SNATYRTLRRVKTAGLYAGVAAVLVYMLFPYYWAIVSSTKTG---QALYQFTLLPALDFS 68
           +NA++R  RR+      AG+   ++ +  P  W ++SS +      A     +   L   
Sbjct: 3   TNASHRLRRRLLKVAHLAGLFLAMLVICLPGLWIVLSSLRPTVEIMAKPPVWIPETLSLD 62

Query: 69  NYRQLFDNPVFMGALV-----NSGVVALVSTAVSLVIGILAAYALGRLHFPPGRIVLIAV 123
            YR +F      G  V     NS +V++ ST ++L IG+   YA  R  F     + +  
Sbjct: 63  AYRAMFSGAGQGGVPVWDYFRNSLIVSVTSTVIALAIGLSGGYAFARYRFKAKSAIFLGF 122

Query: 124 LMISVFPQVVVLSGMFEVIGWLGLYNRPSALIVSYLILTLPFTTWILTSFIRDLPNELEE 183
           ++    P + +   +F +    G+ +   +LI++Y+ L +PFT W++  F R +P +L E
Sbjct: 123 MLTRAVPGIALSLPLFMLYARTGIIDTHFSLILTYVALNVPFTIWLIDGFFRQVPKDLAE 182

Query: 184 AALIDGCSRLRILTHVLLPLMGPAIASTGLLSFILAWNEFLFALTFILTDENRTVPVAIG 243
           AA IDGC+  +    V  PL GP IAS G+ +F+ +WNE+  A     +  ++T+PV  G
Sbjct: 183 AAQIDGCTPWQAFWQVEFPLAGPGIASAGIFAFLTSWNEYALASQITRSVNSKTLPV--G 240

Query: 244 LLTGSSRYEYPFGQIMAASVTVTLPLLVLVLIFQRKIVAGLTSGAVKG 291
           LL  ++ +   +  + A +V + +P L L  I Q+ +V+GLT GAVKG
Sbjct: 241 LLDYTAEFTIDWRGMCALAVVMIVPALTLTFIIQKHLVSGLTFGAVKG 288