Pairwise Alignments

Query, 291 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 292 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score =  143 bits (360), Expect = 5e-39
 Identities = 99/291 (34%), Positives = 152/291 (52%), Gaps = 17/291 (5%)

Query: 12  SNATYRTLRRVKTAGLYA---GVAAVLVYMLF--PYYWAIVSSTKT-GQALYQFTLLPAL 65
           S  T    RR +  GLY     +  +LV +LF  P    +++S +    A      +  L
Sbjct: 7   SATTQPKKRRGRRIGLYVILFHITCILVGLLFLAPIVLVLLASFRPPAMASSGLFSVQGL 66

Query: 66  DFSNYRQLFDNPVFMGALV-----NSGVVALVSTAVSLVIGILAAYALGRLHFPPGRIVL 120
            F NY +L D     GA +     NS  VAL + A ++++ + A Y   R  FP   +  
Sbjct: 67  GFGNYGRLED----FGAGILHYAGNSLFVALATAAFTILVSVFAGYGFSRFRFPFKLVAF 122

Query: 121 IAVLMISVFPQVVVLSGMFEVIGWLGLYNRPSALIVSYLILTLPFTTWILTSFIRDLPNE 180
           + +L   + P   +L+ +F ++  LGL N  S L+  Y+ L LPF+ +++ +    +P E
Sbjct: 123 VLILSTIMVPFQSILTPLFLILPKLGLQNTLSGLVFIYVTLQLPFSIFMMRNAFDAVPKE 182

Query: 181 LEEAALIDGCSRLRILTHVLLPLMGPAIASTGLLSFILAWNEFLFALTFILTDENR-TVP 239
           +EEAA IDG   LR L +VL PL+ P I S GL +F+ AWNEFL AL  +LTD++R T+P
Sbjct: 183 IEEAARIDGVKGLRALVYVLGPLVFPGIVSVGLFAFLNAWNEFLGALV-LLTDQDRYTLP 241

Query: 240 VAIGLLTGSSRYEYPFGQIMAASVTVTLPLLVLVLIFQRKIVAGLTSGAVK 290
           V +  +         +G + A    + +P L+L +  QR  + GLT+GAVK
Sbjct: 242 VLVTAVRSGRYGSIDWGAVQAGVTVMMIPCLILFVTLQRFYIRGLTAGAVK 292