Pairwise Alignments

Query, 359 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 358 a.a., AI-2E family transporter from Magnetospirillum magneticum AMB-1

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 90/331 (27%), Positives = 143/331 (43%), Gaps = 28/331 (8%)

Query: 29  LVALVVGLVVCYFLAVPFLPALTWALVLTVMFRPLHRRIEKRLRYPEAAAAATVAIAAF- 87
           L+  V  LV+ Y L    LP +   + +     PL  R+E R       A A + +  F 
Sbjct: 11  LIGGVAFLVLLYMLRSVMLPFVA-GMAVAYFLDPLADRME-RAGLSRTLATAIICLVFFG 68

Query: 88  VVAVPLTFMAERLVNEAAKGAQ---IVEEAVRSGTWRDALANYPRLAPVVVWIETQLDLA 144
           V+ + LT +A  +  +     Q   +  +++++         Y  L+P    +E     A
Sbjct: 69  VMGLGLTLLAPIIQQQVVTFVQKVPVYAQSLQTRAMPLLEEVYRHLSPED--LEKLRSSA 126

Query: 145 GI-AGSATSWLTNFSASFVRGSVAQIVDAILTFYFL-----FYFLRDGQQALGALKEYSP 198
           G  AG+A  W        + G +A  V +IL+  F+     FY LRD    +  +  + P
Sbjct: 127 GAYAGTAVGWGLGVLKGVLSGGIA--VMSILSLLFITPVVTFYLLRDWDHMVAKVDNWLP 184

Query: 199 LSSQEMNRLFTR-VNETVQAVVFGTVAVAAVQGAMGGLMFWLLGLPAPMVWGLAMGLLAV 257
               E  R   R ++ T+   V G   V  V     G+   + GL   ++ GL  GL A 
Sbjct: 185 RHHAETIRFELREIDRTIAGFVRGQATVCIVLAIFYGVGLTITGLDLGLMIGLGTGLGAF 244

Query: 258 VPVLGAFIVWLPAA-LSLALGGEWGKALILVAWGAGVVATIDNLLY-----PIFVGDRLK 311
           VP +G  I  + +  L+LA GGEW      +  G G+V  I N+L      P  VGDR+ 
Sbjct: 245 VPYVGMLIGLIASVGLALAQGGEWH-----LLGGVGIVFLIGNVLEGNFLTPKLVGDRVG 299

Query: 312 LHTLTAFMSMIGGIIVFGSAGLVIGPVAFTV 342
           LH +    S++ G  +FG  G+++   A +V
Sbjct: 300 LHPVWIIFSLLAGGALFGFVGILLAVPAASV 330