Pairwise Alignments

Query, 334 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 387 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score = 96.7 bits (239), Expect = 9e-25
 Identities = 96/334 (28%), Positives = 147/334 (44%), Gaps = 28/334 (8%)

Query: 7   LVAIVAAGLAGAWWFDLPARLGFAREPRQAVLYGNVDIRQVSLGFRVSGRIAELRVDEGD 66
           LVAI+A    G W+F    +  F      A + G +      LG     RI  + V++  
Sbjct: 51  LVAIIALAFLGHWYF----KGRFYESTDNAYVQGEITRISSQLG----ARIETVPVEDNQ 102

Query: 67  SVKAGDVIAKLDAEPFRQAVGAAEAEAEVTRATLAKL--RAGARAAEIAQARATHEERLA 124
            V  GD++ +L+A  F  AV  A A      A  A+   R   + + IA  +A      A
Sbjct: 103 HVSKGDLLVRLEAADFELAVERARAALATREAEYAQAQSRLTQQGSLIAAGQAQLAATQA 162

Query: 125 ELENAKLAFERAKQLRPNGTISQAELDQANASRAAADARARSAREALVLLEEGNRAEDIA 184
             + ++L   RA++LR  G +S+  +   +A    A ++   AR  L    +   A +  
Sbjct: 163 TFDRSRLDLSRAEKLRKPGFVSEERVTTLSADSHVAGSQVDKARADLQSQRQQVTALNAE 222

Query: 185 AAAAQANAATAKADSARISLEDT--QLAAPSDGVILSRVRETGAIVSPADIVYVLSLT-- 240
                A  A A+ D A+  L  T  ++ AP  G I  R    G +V      Y+LS+   
Sbjct: 223 LKRLDAQIANARTDLAQAELNLTRCEIHAPISGTIGQRNARNGQVVQAG--AYLLSIVPD 280

Query: 241 EPVWVRAYVAEPDLGRVHPGMKVTITSDTAPDRIYEGTVG--FISPVAEFT--PKSVETP 296
           E +WV+A   E  +GR+HPG +  +  D+ PD   EG V   F +  A+F+  P    T 
Sbjct: 281 EDIWVQANFKETQIGRMHPGQRAELLFDSYPDTPIEGRVDSLFAASGAQFSLLPPDNATG 340

Query: 297 ELRTDLVYRLRIVIA----NP--GKDLRQGMPVT 324
              T +V R+ I +     NP  G+ +R GM VT
Sbjct: 341 NF-TKVVQRIPIKLTFHADNPLHGR-IRPGMSVT 372