Pairwise Alignments

Query, 334 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 354 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score =  129 bits (325), Expect = 8e-35
 Identities = 93/316 (29%), Positives = 151/316 (47%), Gaps = 8/316 (2%)

Query: 1   MRKVAILVAIVAAGLAGAWWFDLPARLGFAREPRQAVLYGNVDIRQVSLGFRVSGRIAEL 60
           M K  +L+ +    LA A +F                  G ++  ++ +  + +GR+ ++
Sbjct: 1   MSKKGLLIGLAVVVLAIAAYFAWSKLTAEGLPSGFVASNGRIEAVEIDISTKTAGRLQDI 60

Query: 61  RVDEGDSVKAGDVIAKLDAEPFRQAVGAAEAEAEVTRATLAKLRAGA----RAAEIAQAR 116
            V EGD VKAG V+A++D           +AEA++ RA +A   A +    R AE   A 
Sbjct: 61  MVREGDFVKAGQVLAQMDTAQLEAK--KRQAEAQLRRAKIAIDTAHSLVAQREAEKTSAL 118

Query: 117 ATHEERLAELENAKLAFERAKQLRPNGTISQAELDQANASRAAADARARSAREALVLLEE 176
           A  E+R A+L++A   + R++QL     +SQ  +D + A+  +A A   SA+ +L   + 
Sbjct: 119 AVVEQRKAQLDSASKTYARSRQLLTGNAVSQQIVDDSEATEQSARATLASAQASLAASDA 178

Query: 177 GNRAE--DIAAAAAQANAATAKADSARISLEDTQLAAPSDGVILSRVRETGAIVSPADIV 234
              A    I  A A  +AA A  +S    + D  L +P DG +  R+ + G ++S    V
Sbjct: 179 AINAAKAQIIDAEAAVDAAQADIESIETDIVDATLKSPRDGRVQYRIAQPGEVLSAGGRV 238

Query: 235 YVLSLTEPVWVRAYVAEPDLGRVHPGMKVTITSDTAPDRIYEGTVGFISPVAEFTPKSVE 294
             L     V++  ++   + GR   G  V +  D AP       V F++ VA+FTPK+VE
Sbjct: 239 LNLVDLGDVYMTFFLPTAEAGRTSMGSDVRLILDAAPQYTIPAKVSFVADVAQFTPKTVE 298

Query: 295 TPELRTDLVYRLRIVI 310
           T E R  L +R+R  I
Sbjct: 299 TEEERQKLTFRVRAQI 314