Pairwise Alignments

Query, 334 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 432 a.a., multidrug resistance efflux pump from Agrobacterium fabrum C58

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 103/338 (30%), Positives = 155/338 (45%), Gaps = 33/338 (9%)

Query: 7   LVAIVAAGLAGA-WWFDLPARLGFAREPRQAVLYGNVDIRQVSLGFRVSGRIAELRVDEG 65
           L  +V AG  G  WW D      F      A + G++ +    +  +V+G +A++ V E 
Sbjct: 88  LALLVGAGWYGYNWWIDGR----FMVSTDDAYIQGDIAV----IAPKVAGYVAKVNVVEN 139

Query: 66  DSVKAGDVIAKLDAEPFRQAVGAAEAEAEVTRATLAKLRAGARAAEIAQARATHEERL-- 123
             VKAGD +  LD   +R A   A+A+    + +L ++ A     E AQ +A  ++    
Sbjct: 140 QEVKAGDPLVTLDDGDYRIAFEQADAQIRTEQLSLKRIDAQIIGGEAAQEQAVAQKGALD 199

Query: 124 AELENAKLAFERAKQLRPN--GTIS-----QAELDQANASRAAADARARSAREALVLLEE 176
           A L  A++  +RA +L+    GT++     Q  LDQA A+  A +A   SA+  + LL  
Sbjct: 200 AALRGAEITQKRATELQAKDVGTVAASDNAQVALDQARANVVAGEAAISSAKANVELL-- 257

Query: 177 GNRAEDIAAAAAQANAATAKADSARISLEDTQLAAPSDGVILSRVRETGAIVSPADIVYV 236
             RA+   A +   +   +K  +AR  L  T L AP DGVI +   +TG +VS    +  
Sbjct: 258 --RAQREEAESTIRSLQLSKDKAAR-DLAFTVLKAPYDGVIGNLAVQTGDLVSVGKRLAS 314

Query: 237 LSLTEPVWVRAYVAEPDLGRVHPGMKVTITSDTAPDRIYEGTVGFISP----VAEFTPKS 292
           L     +++ A   E  L RV PG KV +  D   D   EGTV  ISP    V    P  
Sbjct: 315 LVPMNELYIDANFKETQLARVVPGSKVRVHVDAFDDEAIEGTVQSISPGSGSVFSMLPPE 374

Query: 293 VETPELRTDLVYRLRIVIANPGKD-----LRQGMPVTV 325
             T    T ++ R+ + I    +D     LR G+ V V
Sbjct: 375 NATGNF-TKVIQRVPVRIVFSKEDLAKHNLRAGLSVVV 411