Pairwise Alignments

Query, 533 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 529 a.a., microcin C ABC transporter ATP-binding protein YejF from Escherichia coli ECRC62

 Score =  491 bits (1265), Expect = e-143
 Identities = 257/526 (48%), Positives = 353/526 (67%), Gaps = 2/526 (0%)

Query: 4   MKDSILAVRGLKVDFYTPDGTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLLA 63
           M  ++LA+  L V F         V  + L + +GETLA+VGESGSGKS T + I+ LL 
Sbjct: 1   MTQTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLP 60

Query: 64  KNGT--VTGSARYRGQELVGLAPKALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIV 121
                 ++G  R+ G+ L+  + + L  VRG+KI MIFQEPM SL+PL+T+ +Q+ E + 
Sbjct: 61  SPPVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLS 120

Query: 122 HHRGGSFKEARRRVLELLELVGIPEPGRRIDSYPHELSGGQRQRVMIAMALANEPDILIA 181
            HRG   + AR  +L  L+ VGI +  +R+  YPH+LSGG+RQRVMIAMAL   P++LIA
Sbjct: 121 LHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIA 180

Query: 182 DEPTTALDVTIQAQILDLLKSLQRRFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQGM 241
           DEPTTALDV++QAQIL LL+ LQ    M ++ ITH+L IV+  A RVAVM+ G  VEQ  
Sbjct: 181 DEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNY 240

Query: 242 TADIFERPKGDYTRMLLEAEPSGRKASPPDNAPIILEGRNVAVDYTIPGGLFRGASAAFR 301
            A +F  P   YT+ LL +EPSG     P+ A  +L+   + V + I  G+ +       
Sbjct: 241 AATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLLDVEQLQVAFPIRKGILKRIVDHNV 300

Query: 302 AVDGVNLRLRQGQTIGIVGESGSGKSTLGRALLRLLPSSGYYRFGSTDISGFDRGAMRPL 361
            V  ++  LR G+T+G+VGESGSGKST G ALLRL+ S G   F    +   +R  + P+
Sbjct: 301 VVKNISFTLRAGETLGLVGESGSGKSTTGLALLRLINSQGSIIFDGQSLQNLNRRQLLPI 360

Query: 362 RRQLQLVFQDPYGSLSPRRTVGEIITEGLHVHEPDLSRADRDRRAIAALKEVGLDPASRN 421
           R ++Q+VFQDP  SL+PR  V +II EGL VH+P LS A R+++ IA + EVGLDP +R+
Sbjct: 361 RHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMHEVGLDPETRH 420

Query: 422 RYPHEFSGGQRQRIAIARAIILKPKVVILDEPTSALDRSVQGQVIELLRDLQEKHGLSYI 481
           RYP EFSGGQRQRIAIARA+ILKP ++ILDEPTS+LD++VQ Q++ LL+ LQ+KH L+Y+
Sbjct: 421 RYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYL 480

Query: 482 FISHDLSVVKAMSDYVIVMKNGRIVEEGETDAIFDAPREPYTKTLI 527
           FISHDL VV+A+   VIV++ G +VE+G    +F  P++ YT+ L+
Sbjct: 481 FISHDLHVVRALCHQVIVLRQGEVVEQGPCARVFATPQQEYTRQLL 526



 Score =  166 bits (420), Expect = 2e-45
 Identities = 94/246 (38%), Positives = 150/246 (60%), Gaps = 10/246 (4%)

Query: 293 FRGASAAFRAVDGVNLRLRQGQTIGIVGESGSGKSTLGRALLRLLPS------SGYYRFG 346
           FR        V+ V+L++  G+T+ +VGESGSGKS    ++LRLLPS      SG  RF 
Sbjct: 15  FRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVEYLSGDIRFH 74

Query: 347 STDISGFDRGAMRPLR-RQLQLVFQDPYGSLSPRRTVGEIITEGLHVHEPDLSRADRDRR 405
              +       +R +R  ++ ++FQ+P  SL+P  T+ + + E L +H      A R   
Sbjct: 75  GESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGE- 133

Query: 406 AIAALKEVGLDPASRNR--YPHEFSGGQRQRIAIARAIILKPKVVILDEPTSALDRSVQG 463
            +  L  VG+  A++    YPH+ SGG+RQR+ IA A++ +P+++I DEPT+ALD SVQ 
Sbjct: 134 ILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQA 193

Query: 464 QVIELLRDLQEKHGLSYIFISHDLSVVKAMSDYVIVMKNGRIVEEGETDAIFDAPREPYT 523
           Q+++LLR+LQ +  +  +FI+H+LS+V+ ++  V VM+NGR VE+     +F +P  PYT
Sbjct: 194 QILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNYAATLFASPTHPYT 253

Query: 524 KTLIGA 529
           + L+ +
Sbjct: 254 QKLLNS 259