Pairwise Alignments

Query, 597 a.a., surface saccharide ABC transporter ATP-binding/membrane spanning protein from Sinorhizobium meliloti 1021

Subject, 601 a.a., lipid transporter ATP-binding/permease from Pseudomonas simiae WCS417

 Score =  212 bits (539), Expect = 4e-59
 Identities = 164/533 (30%), Positives = 263/533 (49%), Gaps = 18/533 (3%)

Query: 46  PMLGIIAGDGQANGLSGISAYFQAIGEGLGDGERLLVIAAAVLALIVLKNILAFANTLLT 105
           PMLG I      +GLS   A        L D + L  +   ++ +   + + +F    L 
Sbjct: 45  PMLGYIL-KYFVDGLSNPEAVLFPSVPFLRDLQLLQAVPLLIILIAAWQGLGSFLGNYLL 103

Query: 106 TFIYGKASHAIRSALSDQLLRIGYPFFMQQSPGRLLNIISNE----SWRASDAIQTVLSS 161
             +     H +R  L + LL +   +F   + G L++ I+      +  A+DAI+ V+  
Sbjct: 104 AKVSLGLVHDLRVQLFNNLLTLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIRE 163

Query: 162 IVHGSAAVILLAFLLLMSWQMTLFVALGLVFVQLAHAALSATLKGPSRHVTSFNSELAAR 221
              G   + L A LL M+W++TL +   L  + +  +  S   +  S+ +     ++   
Sbjct: 164 ---GMTVIFLFASLLFMNWRLTLVMIAILPLIAVMVSTASKKFRKQSKKIQVAMGDVTHV 220

Query: 222 MLHLVHAGRLIRVFGQETREKNAFDSASDAVRRAGFALQSRQGAL--PPLTEVLHSALFL 279
               +   R++R FG E  E+  F  AS +       + +R GA+  P L  V+++A+ +
Sbjct: 221 ASETIQGYRVVRSFGGEVYEEKRFLKASQSNTNKQLRM-TRTGAIYTPALQLVIYTAMAV 279

Query: 280 AVVVSAWSIG-VSFPVIVAFVVLLYRLQPHMRALQMSWSQIQGWSGSLEEVRWLLDSSDK 338
            + +  +  G  S   +VA++ L   L   +R L    S IQ      E +   LD  ++
Sbjct: 280 LMFLVLYLRGDASAGDMVAYITLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLD--EE 337

Query: 339 PKAPQGNAPVDGLHQGMTFDRVTFRYPGSEVRPLVLHSASFEIRSGRSTAIIGRSGAGKT 398
            +  +G    D +   +    + F YPG+E    VL   SF    G+  A++GRSG+GK+
Sbjct: 338 VEVDRGTIERDKVSGRLDVRNLNFTYPGTERH--VLKDISFTAEPGQMIALVGRSGSGKS 395

Query: 399 TIVNLLCRFVEPDEGRILVDGVPLGQINPVQWRRQIAVASQDLELVDGTILENITYGQ-- 456
           T+ +L+ RF   + G IL+DG+ +     +  R+ IA  +Q + L   T+  NI YG   
Sbjct: 396 TLASLIPRFYHHESGEILLDGIEIENYKLLNLRKHIAQVTQHVTLFSDTVTNNIAYGDLA 455

Query: 457 SATPAEAERAAKLAEAHGFIEQLPQGYETLVGYRGASLSAGQRQRIALARALVRDPAILI 516
            A  AE E AA  A A  FI+QLP+G++T VG  G  LS GQRQR+A+ARAL+++  +LI
Sbjct: 456 GAPRAEVEAAAADANAKDFIDQLPKGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLI 515

Query: 517 LDEATNAVDGLSEAAIVETLRSRAGRRTTIVISHHRSTISFCDDVVVLGSGRV 569
           LDEAT+A+D  SE  I   L      RTT+VI+H  STI   D ++V+  GR+
Sbjct: 516 LDEATSALDTESERHIQAALDKVMQGRTTLVIAHRLSTIEKADLILVMDDGRI 568