Pairwise Alignments

Query, 597 a.a., surface saccharide ABC transporter ATP-binding/membrane spanning protein from Sinorhizobium meliloti 1021

Subject, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

 Score =  207 bits (527), Expect = 1e-57
 Identities = 167/549 (30%), Positives = 271/549 (49%), Gaps = 34/549 (6%)

Query: 44  IIPMLGIIAGDGQANGLSGISAYFQAIGEGLGDGERLLV----------IAAAVLALIVL 93
           ++ ++G +        L+GI  YF    +GL + E +L           +  AV  LI+L
Sbjct: 32  LLSIVGFVIFASTQPMLAGILKYFV---DGLSNPEAVLFPNVPYLRDLQLLQAVPLLIIL 88

Query: 94  KNILAFANTLLTTFIYGKAS----HAIRSALSDQLLRIGYPFFMQQSPGRLLNIISNE-- 147
                   + L  +   K S    H +R AL ++LL +   +F   + G L++ I+    
Sbjct: 89  IAAWQGLGSFLGNYFLAKVSLSLVHDLRVALFNKLLVLPNRYFDNHNSGHLISRITFNVT 148

Query: 148 --SWRASDAIQTVLSSIVHGSAAVILLAFLLLMSWQMTLFVALGLVFVQLAHAALSATLK 205
             +  A+DAI+ V+     G   V L A+LL M+W +TL +   L  + +  +  S   +
Sbjct: 149 MVTGAATDAIKVVIRE---GLTVVFLFAYLLWMNWHLTLVMVAILPVIAVMVSIASKKFR 205

Query: 206 GPSRHVTSFNSELAARMLHLVHAGRLIRVFGQETREKNAFDSASDAVRRAGFALQSRQGA 265
             S+ +     ++       +   R++R FG E  E+  F  AS +       + ++ G+
Sbjct: 206 KQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEQQRFGQASQSNTDKQLRM-TKTGS 264

Query: 266 L--PPLTEVLHSALFLAVVVSAWSIGVSFPV-IVAFVVLLYRLQPHMRALQMSWSQIQGW 322
           L  P L  V++SA+   + +  +  G S    +VA++     L   +R L    S IQ  
Sbjct: 265 LYTPMLQLVIYSAMAALMFLVLFLRGDSTAGDLVAYITAAGLLPKPIRQLSEVSSTIQKG 324

Query: 323 SGSLEEVRWLLDSSDKPKAPQGNAPVDGLHQGMTFDRVTFRYPGSEVRPLVLHSASFEIR 382
               E +   LD +  P+   G    + +   +    ++F YPG+E    VL   SF   
Sbjct: 325 LAGAESIFEQLDEA--PEVDTGTVEKERVEGRLEVRNLSFTYPGTERE--VLSDISFVAE 380

Query: 383 SGRSTAIIGRSGAGKTTIVNLLCRFVEPDEGRILVDGVPLGQINPVQWRRQIAVASQDLE 442
            G+  A++GRSG+GK+T+  L+ RF   D+G+IL+DGV +        RR ++  +Q + 
Sbjct: 381 PGQMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQHVT 440

Query: 443 LVDGTILENITYGQ--SATPAEAERAAKLAEAHGFIEQLPQGYETLVGYRGASLSAGQRQ 500
           L + T+  NI YG    A  A+ E AA  A A  F+++LP+G++T VG  G  LS GQRQ
Sbjct: 441 LFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFDTEVGENGVLLSGGQRQ 500

Query: 501 RIALARALVRDPAILILDEATNAVDGLSEAAIVETLRSRAGRRTTIVISHHRSTISFCDD 560
           R+A+ARAL+++  +LILDEAT+A+D  SE  I   L      RTT+VI+H  STI   D 
Sbjct: 501 RLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQGRTTLVIAHRLSTIEKADQ 560

Query: 561 VVVLGSGRV 569
           ++V+  GR+
Sbjct: 561 ILVMDQGRL 569