Pairwise Alignments

Query, 597 a.a., surface saccharide ABC transporter ATP-binding/membrane spanning protein from Sinorhizobium meliloti 1021

Subject, 595 a.a., lipid A export permease/ATP-binding protein MsbA from Magnetospirillum magneticum AMB-1

 Score =  214 bits (545), Expect = 8e-60
 Identities = 149/501 (29%), Positives = 253/501 (50%), Gaps = 15/501 (2%)

Query: 78  ERLLVIAAAVLALIVLKNILAFANTLLTTFIYGKASHAIRSALSDQLLRIGYPFFMQQSP 137
           E LL +A AVL    +K++  +   +  + +  +    ++S L   L+R+   FF   S 
Sbjct: 66  EFLLPLALAVLGTFAVKSVCNYGEAVFLSKVGLRVIADMQSRLFAHLMRLDVAFFHANST 125

Query: 138 GRLLNIISNESWRASDAIQTVLSSIVHGSAAVI-LLAFLLLMSWQMTLFVALGLVFVQLA 196
           GR+L+ ++N+  +   A+   L+     +++VI L+  +    W+++ +         L 
Sbjct: 126 GRILSRLTNDISQMRFAVSDALTGAGKDASSVIFLIGAMFYQDWRLSAWTFFIFPIAILP 185

Query: 197 HAALSATLKGPSRHVTSFNSELAARMLHLVHAGRLIRVFGQETREKNAFDSASDAVRRAG 256
              L   ++  + +      +L   +   V   R+++ +G E  EK    +  + ++   
Sbjct: 186 IRKLGRRMRKVTANTQEHMGQLTTYLEQAVQGIRVVKAYGMEEYEKRKVGALVEMLQDLI 245

Query: 257 FALQSRQGALPPLTEVLHSALFLAV-------VVSAWSIGVSFPVIVAFVVLLYRLQPHM 309
           +     + A  P+ E+L       V       VV+  +   +F   +  ++L YR    +
Sbjct: 246 YKAARVRSASSPIMELLGGIAITVVILYGGTRVVNGETTPGAFFSFITALMLAYRPIKSL 305

Query: 310 RALQMSWSQIQGWSGSLEEVRWLLDSSDKPKAPQGNAPVDGLHQGMTFDRVTFRYPGSEV 369
            A+    + +Q    +      +LD+        G A +  L   ++F+ V F Y GS+ 
Sbjct: 306 AAMN---TNLQEGLAAASRTFSVLDTQPTIFEKDGAADLVVLEGNVSFEGVFFTYDGSKA 362

Query: 370 RPLVLHSASFEIRSGRSTAIIGRSGAGKTTIVNLLCRFVEPDEGRILVDGVPLGQINPVQ 429
              VL      +  G++ A++G SGAGK+T++NLL RF +  +G +LVDG  +  ++   
Sbjct: 363 ---VLDGIDLAVPGGKTVALVGPSGAGKSTVLNLLPRFYDVTDGHVLVDGQDVRNVSLSS 419

Query: 430 WRRQIAVASQDLELVDGTILENITYGQ-SATPAEAERAAKLAEAHGFIEQLPQGYETLVG 488
            R +IA+ SQ++ L D +I  NI YG+  AT  E E AA+ A AH FI  LP+GY+T+VG
Sbjct: 420 LRSKIALVSQEITLFDDSIRANIAYGRFGATDEEIEAAARSAAAHDFIVSLPEGYDTVVG 479

Query: 489 YRGASLSAGQRQRIALARALVRDPAILILDEATNAVDGLSEAAIVETLRSRAGRRTTIVI 548
            RG +LS GQRQR+A+ARA++++  IL+LDEAT+A+D  SE  +   L      RTTIVI
Sbjct: 480 ERGLNLSGGQRQRLAIARAMLKNAPILLLDEATSALDTESERQVQTALELLMRGRTTIVI 539

Query: 549 SHHRSTISFCDDVVVLGSGRV 569
           +H  ST+   D + VL  GRV
Sbjct: 540 AHRLSTVVNADLIHVLDKGRV 560