Pairwise Alignments

Query, 394 a.a., integral membrane transporter protein from Sinorhizobium meliloti 1021

Subject, 389 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  169 bits (427), Expect = 2e-46
 Identities = 116/377 (30%), Positives = 188/377 (49%), Gaps = 15/377 (3%)

Query: 5   IIWLAVGSFTMSTVGFVFSSLLPSIAADTHTTIPRSGHLITLFSLSYAIGAPLLSALAGA 64
           ++ LA+G+F + T  F    LLP IA     +IP +G LI+ +++   +GAPL++ L   
Sbjct: 7   LLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSH 66

Query: 65  ADRRRLLVTAMLVFVVGNCIAAMSVSFTTLLLAQIVMGMASGLFAATAQAAAVSLAGPEH 124
             RR  L+  M +F +GN ++A++  + TL+L++I+  +  G F       A S+     
Sbjct: 67  RARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHK 126

Query: 125 RALAISIVVGGTTFAVALGAPLGALIAAFWGWRGTFGAVALLGLTCAAVLWLRLPRGLSG 184
           +A A++ +  G T A   G P    +    GWR +F A A LG+     L+  LP+G +G
Sbjct: 127 QASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAG 186

Query: 185 TKLTMSERFGAIGRPGVASSLMVTFLYLTGGFMIISYLAPLAIDGAGLSQLALPGLLLAF 244
            +  + +    + RP V S+L+ T L     F + +Y++P+       + + +  +L+  
Sbjct: 187 ARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLI 246

Query: 245 GVGAVIGNLSSGYLADRLGATRVVTASLISALAVSLMIAFGLHFLTRDLAGLLLIGIMVP 304
           GVG  IGN   G LAD     R V  +L   L + ++I   + FL R+  G  +   MV 
Sbjct: 247 GVGFSIGNYLGGKLAD-----RSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAI--SMVV 299

Query: 305 WGIVGWAFPPAQASRIVGFAPEVAHLTLSLNASAIYLGIATGTAIGGRVLENTAAADLGF 364
           WG   +A  P    R++  A E   L+ S+N  A  LG A G A GG V+    +A LG+
Sbjct: 300 WGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVI----SAGLGY 355

Query: 365 FAALFPVASLAVLYAGL 381
             +  PV  +  + AGL
Sbjct: 356 --SFVPV--MGAIVAGL 368