Pairwise Alignments

Query, 394 a.a., integral membrane transporter protein from Sinorhizobium meliloti 1021

Subject, 394 a.a., involved in either transport or processing of arabinose polymers (VIMSS) from Escherichia coli BW25113

 Score =  124 bits (310), Expect = 6e-33
 Identities = 73/284 (25%), Positives = 136/284 (47%)

Query: 1   MDKRIIWLAVGSFTMSTVGFVFSSLLPSIAADTHTTIPRSGHLITLFSLSYAIGAPLLSA 60
           M K I+ LA+G+F +    F    +L  +A +   +IP +GH+I+ ++L   +GAP+++ 
Sbjct: 1   MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMISYYALGVVVGAPIIAL 60

Query: 61  LAGAADRRRLLVTAMLVFVVGNCIAAMSVSFTTLLLAQIVMGMASGLFAATAQAAAVSLA 120
            +     + +L+  + + V+GN +  +S S+  L + ++V G   G F          + 
Sbjct: 61  FSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKII 120

Query: 121 GPEHRALAISIVVGGTTFAVALGAPLGALIAAFWGWRGTFGAVALLGLTCAAVLWLRLPR 180
            P     A++ +V G T A  LG PLG  ++  + WR TF  +A+  +   A ++  +P 
Sbjct: 121 KPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVMASVYFWVPD 180

Query: 181 GLSGTKLTMSERFGAIGRPGVASSLMVTFLYLTGGFMIISYLAPLAIDGAGLSQLALPGL 240
                K  + E+F  +  P        T     G F   SY+ P  +  +G S+ A+  +
Sbjct: 181 IRDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYVKPYMMFISGFSETAMTFI 240

Query: 241 LLAFGVGAVIGNLSSGYLADRLGATRVVTASLISALAVSLMIAF 284
           ++  G+G V+GN+ SG ++ R    R+   +    +   LM+ F
Sbjct: 241 MMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIVLALLMLFF 284