Pairwise Alignments

Query, 453 a.a., reverse transcriptasematurase from Sinorhizobium meliloti 1021

Subject, 505 a.a., reverse transcriptase from Sinorhizobium meliloti 1021

 Score =  166 bits (420), Expect = 2e-45
 Identities = 148/457 (32%), Positives = 213/457 (46%), Gaps = 74/457 (16%)

Query: 55  LQRAWKRVKANKGA--AGADGLSIEATAAHLRTSW-PDIRERVLAGTYRPMPVRRVTIPK 111
           L+ AW+RV +NKG   AG DG+++          +  D++  + +G YRP P RR  IPK
Sbjct: 44  LRHAWQRVASNKGGRTAGVDGMTVGRIRNRSEHRFLVDLQADLRSGAYRPSPARRKLIPK 103

Query: 112 PD--GGERELGIPTVTDRLIQQALLQVLQPLLDPAFSEHSHGFRPGRSAHDAVLEAQSYV 169
               G  R LGIPT+ DR++Q A   +L+P+ +  F   S+GFRPGR+ H A+   +   
Sbjct: 104 AGKPGQFRPLGIPTIRDRVVQGAAKILLEPIFEAQFWHVSYGFRPGRNTHGALEYIRRAA 163

Query: 170 QSGRRI------------VVDVDLEKFFDRVNHDILIDRLSKRISDRRVIRLIRAYLNSG 217
              +R             V++ D++  FD +NH  L++R+ KRI DRRV+RL+  +L +G
Sbjct: 164 LPQKRDEDTRRNRLPYPWVIEGDIKGCFDNINHHHLLERMRKRIGDRRVVRLVGLFLKAG 223

Query: 218 IMDHGVVQERVMGTPQGGPLSPLLANVLLDEVDKELER---------------------- 255
           ++          GTPQGG +SPLLAN+ L  +++  ER                      
Sbjct: 224 VLTEDQFLRTDAGTPQGGIISPLLANIALSAIEERYERWTYHRKKTQARRKSNGVAAAAS 283

Query: 256 -------RGHCF---VRYADDCNVYVGS--RKAGERVMALLRRLYGRLHLTINEGKSAVT 303
                   G C    VRYADD  V V     +A     AL   L     LT+   K+ VT
Sbjct: 284 ARDSDRIAGRCVYLPVRYADDFVVLVSGSLEEAMAEKSALADYLIKTTGLTLLPEKTKVT 343

Query: 304 SVF-GRKFLGFSF---WRGRDGAVKRRVADKPLNA-FKRRVRQLTRR-SGGRSMAEVAER 357
           ++  G +FLGF F   W  R G   R    K   A  + +V+QLT+R S   S+ E    
Sbjct: 344 AMTEGFEFLGFRFSVHWDKRYGYGPRVEIPKAKAANLRHKVKQLTQRDSISVSLGEKLRG 403

Query: 358 LRVYVLGWKAYFR-LAQTPRLFKELEEWMRHRVRAIQLKHWKRGKTTYKALLAKGAKPEA 416
           +     GW  Y+R      R+F  L+ ++   +R     H KR K T   L   G+K  +
Sbjct: 404 VNAITSGWANYYRYCVGAGRVFVALDWYI--GLRLYCWLHKKRPKATPSELW--GSKQPS 459

Query: 417 ARQIAVNSRRWWRNSGMLLNSVL--------TLRWMD 445
            R+    +RR WR  G +   VL         L WMD
Sbjct: 460 RRRA---TRRVWR-EGSVEQHVLGWTPVDRYRLAWMD 492