Pairwise Alignments

Query, 453 a.a., reverse transcriptasematurase from Sinorhizobium meliloti 1021

Subject, 419 a.a., reverse transcriptasematurase of intron RmInt1 protein from Sinorhizobium meliloti 1021

 Score =  161 bits (408), Expect = 3e-44
 Identities = 117/375 (31%), Positives = 188/375 (50%), Gaps = 28/375 (7%)

Query: 50  LARENLQRAWKRVKANKGAAGADGLSIEATAAHLRTSWPDIRERVLAGTYRPMPVRRVTI 109
           + +  +  A+K VKAN+GAAG DG ++E     L  +   I  R+ +GTY P PVR V+I
Sbjct: 13  IEKRRVYEAYKAVKANRGAAGVDGQTLEIFEKDLAANLYKIWNRMSSGTYFPPPVRAVSI 72

Query: 110 PKPDGGERELGIPTVTDRLIQQALLQVLQPLLDPAFSEHSHGFRPGRSAHDAVLEAQSYV 169
           PK  GGER LG+PTV+DR+ Q  + Q+++P LD  F   S+G+RPG+SA DAV   +   
Sbjct: 73  PKKAGGERVLGVPTVSDRIAQMVVKQMIEPDLDSLFLPDSYGYRPGKSALDAVGVTRQRC 132

Query: 170 QSGRRIVVDVDLEKFFDRVNHDILIDRLSKRISDRRVIRLIRAYLNSGIMDHGVVQERVM 229
                 V++ D++  FD + HD+L+  + K +     +  I  +L + +  +G V ER  
Sbjct: 133 WK-YDWVLEFDIKGLFDNLPHDLLLKAVRKDVKCNWALLYIERWLTAPMEKNGEVIERSR 191

Query: 230 GTPQGGPLSPLLANVLLDEVDKELERRGH---CFVRYADDCNVYVGSRKAGERVMALLRR 286
           GTPQGG +SP+LAN+ L         R H    + RYADD  V+  S +  E +   L  
Sbjct: 192 GTPQGGVVSPILANLFLHYAFDLWMTRTHPDLPWCRYADDGLVHCQSEQQAEALKVELSS 251

Query: 287 LYGRLHLTINEGKSAVTSVFGRK-----------FLGFSF---------WRGRDGAVKRR 326
                 L ++  K+ +     ++           FLG+ F         W          
Sbjct: 252 RLAACGLQMHPTKTKIVYCKDQRRREAYPNVTFDFLGYQFRPRRVANTQWDEFFCGYTPA 311

Query: 327 VADKPLNAFKRRVRQLT--RRSGGRSMAEVAERLRVYVLGWKAYFRLAQTPRLFKELEEW 384
           V+   L + +  ++ L   R++ G ++AE+A++L   + GW AY+       L   L ++
Sbjct: 312 VSPTALKSMRATIKSLNIPRQTPG-TLAEIAKQLNPLLRGWIAYYGRYSRSAL-STLADY 369

Query: 385 MRHRVRAIQLKHWKR 399
           +  ++RA   + +KR
Sbjct: 370 VNQKLRAWIRRKFKR 384