Pairwise Alignments

Query, 453 a.a., reverse transcriptasematurase from Sinorhizobium meliloti 1021

Subject, 473 a.a., Group II intron-encoding maturase from Pseudomonas putida KT2440

 Score =  384 bits (985), Expect = e-111
 Identities = 201/406 (49%), Positives = 271/406 (66%), Gaps = 6/406 (1%)

Query: 45  LLEAALARENLQRAWKRVKANKGAAGADGLSIEATAAHLRTSWPDIRERVLAGTYRPMPV 104
           L+E  LA  NL+RA++RV +NKGA GADG+++   A ++R  WP ++ R+LAG Y+P  V
Sbjct: 55  LMERVLAPANLRRAYQRVVSNKGAPGADGMTVADLAGYVRQYWPTLKVRLLAGEYQPQAV 114

Query: 105 RRVTIPKPDGGERELGIPTVTDRLIQQALLQVLQPLLDPAFSEHSHGFRPGRSAHDAVLE 164
           R V IPKP GG R+LGIP+V DRLIQQAL Q L P+ DP FS++S+GFRPGRS H A+  
Sbjct: 115 RAVEIPKPQGGTRQLGIPSVVDRLIQQALQQQLTPIFDPLFSDYSYGFRPGRSTHQAIEM 174

Query: 165 AQSYVQSGRRIVVDVDLEKFFDRVNHDILIDRLSKRISDRRVIRLIRAYLNSGIMDHGVV 224
           A+++V +G R  V++DLEKFFDRVNHDIL+  + +RI D+ V+RLIR YL +GIM  GVV
Sbjct: 175 ARAHVTAGHRWCVELDLEKFFDRVNHDILMACIERRIRDKCVLRLIRRYLEAGIMSGGVV 234

Query: 225 QERVMGTPQGGPLSPLLANVLLDEVDKELERRGHCFVRYADDCNVYVGSRKAGERVMALL 284
             R  GTPQGGPLSPLL+N+LLDE+D+ELERRGH FVRYADD N+YV S +AGERV+  +
Sbjct: 235 SPRQEGTPQGGPLSPLLSNILLDELDRELERRGHRFVRYADDANIYVRSPRAGERVLVSV 294

Query: 285 RR-LYGRLHLTINEGKSAVTSVFGRKFLGFSF-WRGRDGAVKRRVADKPLNAFKRRVRQL 342
            R L  RL LT+N  KS V   +   +LG+   W  +    + RVA   L+  + R+R L
Sbjct: 295 ERFLRERLKLTVNRKKSQVARAWKCDYLGYGMSWHQQP---RLRVARMSLDRLRDRLRML 351

Query: 343 TRRSGGRSMAEVAERLRVYVLGWKAYFRLAQTPRLFKELEEWMRHRVRAIQLKHWKRGKT 402
            R    R MA V ER+   + GW +YF+L+Q+ R  +EL+ W+RH++R +  + WK+  T
Sbjct: 352 LRSVRARKMATVIERINPVLRGWASYFKLSQSKRPLEELDGWVRHKLRCVIWRQWKQPPT 411

Query: 403 TYKALLAKGAKPEAARQIAVNSR-RWWRNSGMLLNSVLTLRWMDAL 447
             + L+  G   E A + A N R  WW +    +N  L  +  D L
Sbjct: 412 RLRNLMRLGLSEERANKSAFNGRGPWWNSGAQHMNYALPKKLWDRL 457