Pairwise Alignments

Query, 453 a.a., reverse transcriptasematurase from Sinorhizobium meliloti 1021

Subject, 446 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 61.2 bits (147), Expect = 6e-14
 Identities = 81/352 (23%), Positives = 145/352 (41%), Gaps = 47/352 (13%)

Query: 68  AAGADGLSIEATAAHLRTSWPDIRERVLAGTYRPMPVRRVTIPKPDGG-ERELGIPTVTD 126
           A G DG+ +E  A  L      I  +   G Y+    +   + K  G   R L IPTV D
Sbjct: 36  AVGRDGVRVEKFAEKLNDEVALIVRKASDGKYKFTKYKLKLVSKGVGKIPRVLSIPTVRD 95

Query: 127 RLIQQALLQVLQPLLDPAFSEHSHGFRPGRSAHDAVLEAQSYVQSGRRIVVDVDLEKFFD 186
           RL  +A+ + L  +   A ++  H +        A+ E+ + +     + + +D++ ++ 
Sbjct: 96  RLALRAMCEFLSTIFPDAVTKKPHSY------IKAIRESLNSLDDS-AVFLRIDVKDYYP 148

Query: 187 RVNHDILIDRLSKRISDRRVIRLIRAYLN---SGIMDHGVVQERVMGTPQGGPLSPLLAN 243
            ++  +L   + KRI  R+   +I A ++   +G  D G+        PQG  +S +LA 
Sbjct: 149 SIDRTVLESIIRKRIRKRQARDIIMAAVSTTTTGGDDSGI--------PQGLSISNILAG 200

Query: 244 VLLDEVDKELERRGHCFVRYADD----CNVYVGSRKAGERV-MALLRRLYGRLHLTINEG 298
           + L + D   E R   F RY DD    C     + KA + +   LL     + H     G
Sbjct: 201 IYLRDFDIYAEGRWKYF-RYVDDILIICKDTNEADKAYQEISKKLLAEKKLQCHPISENG 259

Query: 299 KSAVTSVF-GRKFLGFSFWRG----RDGAVKRRVADKPLNAFKRRVRQLTRRSGGRSMAE 353
           KS +  V  G  +LG++  +     R+ + K        N F + +  LT     +  A+
Sbjct: 260 KSCIKKVTDGVDYLGYTVSKNMISVREASYK--------NIFPKILSVLTYHRHHKDEAK 311

Query: 354 VAERLRVYV---------LGWKAYFRLAQTPRLFKELEEWMRHRVRAIQLKH 396
           +  RL + +          GW  +F   +       L+ +++ ++    L H
Sbjct: 312 LIWRLNLKISGCIFNGKNFGWMFFFMQTKNTSQLVNLDRFVKSQLSKRGLDH 363