Pairwise Alignments

Query, 285 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 280 a.a., Inner membrane ABC transporter permease protein YcjP from Escherichia coli ECRC101

 Score =  168 bits (425), Expect = 1e-46
 Identities = 94/280 (33%), Positives = 154/280 (55%), Gaps = 2/280 (0%)

Query: 6   MINRYRWYELVGIYGGIFVFLTFILAPFVEGFLVSLKPLGRLFSSPYRFWPENGSFEAYR 65
           M    R    +G Y G+ +FL   L PF    + S K      S      P+  + E Y 
Sbjct: 1   MATNKRTLSRIGFYRGLALFLIITLFPFFVMLMTSFKSAKEAISLHPTLLPQQWTLEHYV 60

Query: 66  TMWVSVP-GFARYIFNSFFISIIVTAVVLALVVPAAYAFARFKFRGSGALLAAFLAVNMF 124
            ++  V   F  Y  NS  +S++ + V + L +  AYA +R +F+G   + A+F  V MF
Sbjct: 61  DIFNPVIFPFVDYFRNSMVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMF 120

Query: 125 SGAVLLIPLFRLMRSFGVLNTYFAMIVPGVAFLIPSAIWLLRTYMMRIPRELDEAAFVDG 184
           SG +L++PLF+++ + G+ +T  A+I+  V   +P+A+++L++Y   IP E++EAA +DG
Sbjct: 121 SGILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDG 180

Query: 185 ASHFYTLRRVILPIAMPGITVVAITTFIGSYAQQFIFALTFNSKSEYMPLPVGLFAYFGR 244
            +    + R+ +P+AM G+  V +  F+ ++   ++FA  F S +    LPVGL A F  
Sbjct: 181 LNRLQIIFRITVPLAMSGLISVFVYCFMVAW-NDYLFASIFLSSASNFTLPVGLNALFST 239

Query: 245 QEVVWNELMAASFVGIAPAVIVIFFLQRYLVSGLTAGAVK 284
            + +W  +MAAS V   P VI+    +R++ SGLTAG VK
Sbjct: 240 PDYIWGRMMAASLVTALPVVIMYALSERFIKSGLTAGGVK 279