Pairwise Alignments

Query, 294 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., Inner membrane ABC transporter permease protein YcjO from Xanthobacter sp. DMC5

 Score =  172 bits (436), Expect = 9e-48
 Identities = 92/275 (33%), Positives = 153/275 (55%), Gaps = 2/275 (0%)

Query: 15  LLPAVFYVTVIVAYPLVDTFVLSFTDASLKKTTKWVGTANYDKIF-NATFAEVILRTFVW 73
           ++PA  ++   + YPL     L FTD  + +   ++G  NY  ++ ++ F  V+  T ++
Sbjct: 31  MVPAAVFLLFFLTYPLGLGVWLGFTDTRIGREGVFIGLENYQSLWGDSLFWLVVFNTLLY 90

Query: 74  TAFSVTIKMIIGTFGAVMLNAAVPGRALFRVLTMPPWIVPMAIGIFMWGWMYNGQFGMIS 133
           T  +  +K  +G + A++LN  +P +A FR + + PW+VP  +    + W+++ Q+ +IS
Sbjct: 91  TIAASILKFALGLWLALLLNENLPFKAFFRAVVLLPWVVPTVLSAIAFWWIFDSQYSIIS 150

Query: 134 GTLQNWGLVDGPVAFLAHGSTAFWATIVTDVWIGVPLVTLYMLASMQAIPQDLYEAAWTD 193
             L   GL+  P+ FL   + A  + I  +VW G+P V + +LA +Q I   L+EAA  D
Sbjct: 151 WALIKMGLISAPINFLGDVTNARASVIAANVWRGIPFVAISLLAGLQTISPSLHEAATLD 210

Query: 194 GAGRFYRFRRITLPLLVPSMITMSMLSLIATFNSFDIIWILTQGGPNGDTTTMIIDTYRT 253
           GA  + RFR ITLP+L P +  +   S++ TF  F +I++LT+GGP   T  M   +++ 
Sbjct: 211 GATNWQRFRYITLPMLSPIIAVVMTFSVLFTFTDFQLIYVLTRGGPLNSTHLMATLSFQR 270

Query: 254 AIGSKKYGEGAARAV-LICIFLSIFCIAYFRVTHR 287
           AI     GEGAA AV +I   L+    +YF +  R
Sbjct: 271 AIPGGSLGEGAAIAVAMIPFLLAAILFSYFGLQRR 305