Pairwise Alignments

Query, 294 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 286 a.a., Inner membrane ABC transporter permease protein YcjO from Xanthobacter sp. DMC5

 Score =  157 bits (398), Expect = 2e-43
 Identities = 91/284 (32%), Positives = 149/284 (52%), Gaps = 6/284 (2%)

Query: 3   VRRSTIIFAWVLLLPAVFYVTVIVAYPLVDTFVLSFTDA-SLKKTTKWVGTANYDKIFNA 61
           V     I++++ L  AV    +++  P+V    LSF    S     KW G  NY ++ + 
Sbjct: 1   VSSKATIYSFLFLGLAV--TALLIVAPVVYAVSLSFYQMDSFVGAPKWAGLDNYTRMLSQ 58

Query: 62  -TFAEVILRTFVWTAFSVTIKMIIGTFGAVMLNAAVPGRALFRVLTMPPWIVPMAIGIFM 120
             F   ++  F+++  ++  ++++G   A++LN   PGR + R L++ P+++P  + +  
Sbjct: 59  WVFWRALINGFIYSFGTIIFQVVLGIGFALVLNQVFPGRNIVRGLSILPYLLPTVVVVLT 118

Query: 121 WGWMYNGQFGMISGTLQNWGLVDGPVAFLAHGSTAFWATIVTDVWIGVPLVTLYMLASMQ 180
           + WM +G  G+++  +   GL    V +      A  + I+  VW+  P VT   LA++Q
Sbjct: 119 FKWMVDGSIGVLTTMMSALGLPQ--VQWFESPGAAMASVILVSVWMWTPFVTTTFLAALQ 176

Query: 181 AIPQDLYEAAWTDGAGRFYRFRRITLPLLVPSMITMSMLSLIATFNSFDIIWILTQGGPN 240
            +P  LYEAA  DG     RF  ITLP+L P +  + +L  +  FN FD+IW+LTQGGP 
Sbjct: 177 TVPSSLYEAAKVDGTNAVQRFFHITLPMLKPILTVIVLLRAVWMFNKFDVIWLLTQGGPV 236

Query: 241 GDTTTMIIDTYRTAIGSKKYGEGAARAVLICIFLSIFCIAYFRV 284
           G T  + I +Y+ A G    G GAA A +    LS+    YFR+
Sbjct: 237 GATEHLAILSYKQAFGQFDIGGGAAVATISFAILSLVVFIYFRL 280