Pairwise Alignments

Query, 294 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., ABC transporter for L-Fucose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  129 bits (325), Expect = 6e-35
 Identities = 90/276 (32%), Positives = 141/276 (51%), Gaps = 9/276 (3%)

Query: 13  VLLLPAVFYVTVIVAYPLVDTFVLSFTDASLKKTTK---WVGTANYDKIF-NATFAEVIL 68
           +LLLPA   + V +  PL+ +   SFT   L K      ++G  NY  +  NA F     
Sbjct: 11  LLLLPAFIVLAVFIVLPLIFSLYSSFTPFRLTKPDSLWVFIGFRNYVNVLTNAEFWVAFG 70

Query: 69  RTFVWTAFSVTIKMIIGTFGAVMLNAAVPG-RALFRVLTMPPWIVPMAIGIFMWGWMYNG 127
           RT +    ++  +M +G   A+++N A  G RAL   +  P    P+ +G F + +++N 
Sbjct: 71  RTVLLLTVALNAEMFLGLGLALLVNKATYGQRALRTAMMFPMMFSPVLVG-FQFKFLFND 129

Query: 128 QFGMISGTLQNWGLVDGPVAFLAHGSTAFWATIVTDVWIGVPLVTLYMLASMQAIPQDLY 187
             G ++  LQ+ GL D  + +L  G+ A ++ IV +VW    +  + +LA + A+P+D  
Sbjct: 130 NIGFVNNALQSLGLTDRAIPWLIDGNLALFSIIVAEVWSSTAVFAILILAGLLAMPKDPV 189

Query: 188 EAAWTDGAGRFYRFRRITLPLLVP-SMITMSMLSLIATFNSFDIIWILTQGGPNGDTTTM 246
           EAA  DG   +  FR +T P L+P + I M++ SL     ++DI+ I+T GGP   T  +
Sbjct: 190 EAAHVDGCTPWQTFRYVTWPYLMPFAFIAMTIRSLDVA-RAYDIVKIMTDGGPAKRTELL 248

Query: 247 IIDTYRTAIGSKKYGEGAARAVLICIFLSIFCIAYF 282
                RTA G  + G   A A  + I LSIF   YF
Sbjct: 249 WTLIGRTAYGDARMGMANAMA-YVAILLSIFFTVYF 283