Pairwise Alignments

Query, 294 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 343 a.a., Lactose transport system permease protein LacF from Azospirillum sp. SherDot2

 Score =  118 bits (296), Expect = 2e-31
 Identities = 83/295 (28%), Positives = 141/295 (47%), Gaps = 19/295 (6%)

Query: 12  WVLLLPAVFYVTVIVAYPLVDTFVLSFTDAS--LKKTTKWVGTANYDKIFNA-------- 61
           +V LLP + +  + V  P+    V S T  +        +VG  +Y ++ +         
Sbjct: 52  YVFLLPNLLFFGLFVFLPIGINIVFSVTGGTGLFPSERPYVGAEHYARLLDCGSYLEAGS 111

Query: 62  ----TFAEVILRTFVWTAFSVTIKMIIGTFGAVMLNAAVPGRALFRVLTMPPWIVPMAIG 117
                F   +  T  +T F +   ++     A++LN  + GR  FR +   P ++   + 
Sbjct: 112 CREDLFWRGVGNTLTFTVFQMVAMVLFSLVTALVLNRPIRGRGFFRAVYFFPVLLSPVVV 171

Query: 118 IFMWGWMYNGQFGMISGTLQNWGLVDGPVAFLAHGSTAFWATIVTDVWIGVPLVTLYMLA 177
             +W W+     G+++  L   G  +  + F+  G   FWA  V+ VW  +   TL +LA
Sbjct: 172 ALIWKWILQRD-GLLNAVLTTAG-GEKILFFVDPGWAMFWAVFVS-VWAHMGFYTLILLA 228

Query: 178 SMQAIPQDLYEAAWTDGAGRFYRFRRITLPLLVPSMITMSMLSLIATFNSFDIIWILTQG 237
            +QAIP+D+YEAA  DG   +  F RITLPLL P+++ + +L LI +   FD +++LT G
Sbjct: 229 GLQAIPRDVYEAAEMDGTRPWRVFHRITLPLLWPNLLVVLVLVLIRSVQVFDEVFVLTGG 288

Query: 238 GPNGDTTTMIIDTYRTAIGS--KKYGEGAARAVLICIFLSIFCIAYFRVTHRLAT 290
           GP   T  ++   Y TA  +  + +G   A +VL+   L +  +    +T R A+
Sbjct: 289 GPGTATMMVVQYIYTTAFANQVQNFGLAGAASVLLGAVLFVLTLIQLFLTRRRAS 343