Pairwise Alignments

Query, 294 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 311 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score =  124 bits (310), Expect = 4e-33
 Identities = 82/278 (29%), Positives = 133/278 (47%), Gaps = 6/278 (2%)

Query: 12  WVLLL---PAVFYVTVIVAYPLVDTFVLSFTDASLKKTTKWVGTANYDKIFN-ATFAEVI 67
           W+ LL   PA+  V V    PL  T  +S  +  L    +W+G ANY  ++N   F   +
Sbjct: 27  WMGLLYVAPALLLVLVFFLVPLGMTAWMSLHNWPLIGMPRWIGFANYKVLWNDINFWNAL 86

Query: 68  LRTFVWTAFSVTIKMIIGTFG-AVMLNAAVPGRALFRVLTMPPWIVPMAIGIFMWGWMYN 126
             T  +T  + T+ +++  FG A+++    P   L+R     P ++  A    +W W+ N
Sbjct: 87  AFTIRYTV-AATVGLMLAGFGLALLIERPRPFANLYRNAFFLPVVIGFASASLLWSWLSN 145

Query: 127 GQFGMISGTLQNWGLVDGPVAFLAHGSTAFWATIVTDVWIGVPLVTLYMLASMQAIPQDL 186
              G+ S   +  GL DG V  LA  + +FW+     +W       + +++ +QAIP D 
Sbjct: 146 VDSGLFSPLAETLGLTDGRVNLLATFAPSFWSVTAMVIWKMAGFYMVILMSGLQAIPTDF 205

Query: 187 YEAAWTDGAGRFYRFRRITLPLLVPSMITMSMLSLIATFNSFDIIWILTQGGPNGDTTTM 246
            EAA  DGA    RFR ITLPL+  S     +L +  +  +FD  +I+  GGP   T T 
Sbjct: 206 IEAARIDGANALQRFRFITLPLVRRSFALALILCISGSMLAFDQFYIILAGGPQNKTITA 265

Query: 247 IIDTYRTAIGSKKYGEGAARAVLICIFLSIFCIAYFRV 284
           +   +  +  S + G GAA ++++   L +  I   R+
Sbjct: 266 VYWIFSQSFVSFRLGYGAALSMVLLAILVVLSIVQLRL 303