Pairwise Alignments

Query, 245 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 238 a.a., glycine/betaine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  132 bits (333), Expect = 5e-36
 Identities = 81/217 (37%), Positives = 119/217 (54%), Gaps = 11/217 (5%)

Query: 12  VLAVLLAFLVQPAWFEPLLKPLVQENAPAVYNQGSLFWLTVLHLRTVFVATVAATIVAVS 71
           V+  LLA LV   W        +  N   +Y    LF+L   HL  V V+ +AA +V + 
Sbjct: 14  VVVALLALLVH--W--------IGINTIELYRDDLLFYLQA-HLILVLVSMLAALVVGIP 62

Query: 72  LAIIVTRKAGAEFLPLSRSLVNIGQTFPPVAVLALAVPIYGFGEKPTLIALFLYGLLPIF 131
             I+++R            + NIG T PP+AVLA+A+ + G G  P + ALFL  LLPI 
Sbjct: 63  AGILLSRPNMVGRAERFMQIFNIGNTVPPLAVLAIALGVLGIGSGPAIFALFLASLLPIV 122

Query: 132 ENALTGLTTLPPTVMEAARGAGMTGRQRLFRIELPLALPVILTGIRLSVVISLATATIGS 191
            N   GL  +  ++ EAA G GMT RQ LFR+ELP A+P+I+ G+R+++ I++ TA +  
Sbjct: 123 RNTYEGLKNVQGSLKEAAVGIGMTPRQVLFRVELPNAVPIIIGGVRVALAINVGTAPLAF 182

Query: 192 TVAARTLGEVIIAGLQSNNLAFVLQGGLIVGALAVLI 228
            + A +LG +I  G+  NN   +L G      LA+L+
Sbjct: 183 LIGANSLGSLIFPGIALNNQPQLLLGAACTALLALLL 219